RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ALADP13716 330 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 WARSP23381 471 aaKnown RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 CTGFP29279 349 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 WASHC5Q12768 1159 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 STX3Q13277 289 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 TAC4Q86UU9 113 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 EPAS1Q99814 870 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 IARS2Q9NSE4 1012 aaKnown RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 SOAT2O75908 522 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 BAG2O95816 211 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 POLBP06746 335 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 NCF2P19878 526 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 RASA2Q15283 850 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 BTBD8Q5XKL5 378 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 OVOS1Q6IE37 1185 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 RFWD3Q6PCD5 774 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 PDZD4Q76G19 769 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 MIB1Q86YT6 1006 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 POU5F2Q8N7G0 328 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 TRIB2Q92519 343 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 CENPIQ92674 756 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 SCYL1Q96KG9 808 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZNF778Q96MU6 729 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 EBF4Q9BQW3 602 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 VANGL2Q9ULK5 521 aa11.82□□□□□ -0.52
ARHGEF1-220ENST00000600274 PLXNB2O15031 1838 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 HOXD8P13378 290 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 CALRP27797 417 aaKnown RBP11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 PCSK1P29120 753 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 LHX1P48742 406 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 NEK3P51956 506 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZBTB17Q13105 803 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 MFSD14CQ5VZR4 134 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 ATG16L1Q676U5 607 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 PACS1Q6VY07 963 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 RASAL3Q86YV0 1011 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC25A41Q8N5S1 370 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 HIPK4Q8NE63 616 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 UTP4Q969X6 686 aaKnown RBP11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 SGF29Q96ES7 293 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 KANSL3Q9P2N6 904 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC39A10Q9ULF5 831 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 DNAJC16Q9Y2G8 782 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 TTC24A2A3L6 582 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 OPHN1O60890 802 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 PTPN3P26045 913 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 FDFT1P37268 417 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 ADAM17P78536 824 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 SEMA5AQ13591 1074 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 ITGA9Q13797 1035 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 UBAP2LQ14157 1087 aaKnown RBP11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 KCNA10Q16322 511 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 DDR2Q16832 855 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 THEMIS2Q5TEJ8 643 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 VWA5B1Q5TIE3 1220 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 SPATA2LQ8IUW3 424 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 SMARCD1Q96GM5 515 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 C20orf27Q9GZN8 174 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 SPATS2LQ9NUQ6 558 aaKnown RBP11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 PLXNA1Q9UIW2 1896 aa11.81□□□□□ -0.52
ARHGEF1-220ENST00000600274 LOC100653049A0A140TA62 436 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 HMX2A2RU54 273 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 ITM2AO43736 263 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 KRT34O76011 436 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC4A1P02730 911 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 T-ENOLP0DO92 83 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 ODC1P11926 461 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PBX3P40426 434 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PGFP49763 221 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 RASSF2P50749 326 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PRKCZQ05513 592 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC39A12Q504Y0 691 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 RNF135Q8IUD6 432 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 CYP4F11Q9HBI6 524 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 MAN1C1Q9NR34 630 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 GTF2IRD1Q9UHL9 959 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 FNDC3AQ9Y2H6 1198 aaKnown RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRRC37A2A6NM11 1700 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 B2RBV5 119 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 HAS3O00219 553 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 NEMP1O14524 444 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PHGDHO43175 533 aaKnown RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 ITGA2BP08514 1039 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 CCND3P30281 292 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 ETV4P43268 484 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 CFAP157Q5JU67 520 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRRTM3Q86VH5 581 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 FAM13CQ8NE31 585 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 FAM136AQ96C01 138 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 OXNAD1Q96HP4 312 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 CLPTM1LQ96KA5 538 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 FAM161BQ96MY7 647 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 FCRL3Q96P31 734 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 NKX1-2Q9UD57 310 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PRRC2BQ5JSZ5 2229 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms