RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ZDHHC4Q9NPG8 344 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 ABCB8Q9NUT2 735 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 AP4E1Q9UPM8 1137 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
VRK3-219ENST00000600137 NUP205Q92621 2012 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 BTNL10A8MVZ5 291 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 PRPSAP2O60256 369 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 ADAM23O75077 832 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 CLDN11O75508 207 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 PABPC1P11940 636 aaKnown RBP14.15□□□□□ -0.14
VRK3-219ENST00000600137 HNRNPLP14866 589 aaKnown RBP eCLIP14.15□□□□□ -0.14
VRK3-219ENST00000600137 IL4RP24394 825 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 MZF1P28698 734 aaPredicted RBP14.15□□□□□ -0.14
VRK3-219ENST00000600137 MAN1A1P33908 653 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 ARHGAP25P42331 645 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 MAGEA9P43362 315 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 VAV2P52735 878 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 MRPS21P82921 87 aaKnown RBP14.15□□□□□ -0.14
VRK3-219ENST00000600137 ENPP2Q13822 863 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 MESDQ14696 234 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 FUT11Q495W5 492 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 BOLA3Q53S33 107 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 KCNT1Q5JUK3 1230 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 TTC39BQ5VTQ0 682 aaPredicted RBP14.15□□□□□ -0.14
VRK3-219ENST00000600137 PSTKQ8IV42 348 aaKnown RBP14.15□□□□□ -0.14
VRK3-219ENST00000600137 MFN1Q8IWA4 741 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 APCDD1Q8J025 514 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 IL17RCQ8NAC3 791 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 FAM71BQ8TC56 605 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 EXOC4Q96A65 974 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 TTC17Q96AE7 1141 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 CD248Q9HCU0 757 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 ELOVL2Q9NXB9 296 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 GGA2Q9UJY4 613 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 CACNA1HO95180 2353 aa14.15□□□□□ -0.14
VRK3-219ENST00000600137 MUC22E2RYF6 1773 aaPredicted RBP14.14□□□□□ -0.15
VRK3-219ENST00000600137 WASH4PA8MWX3 477 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 H0Y626 953 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 BUB1BO60566 1050 aaPredicted RBP14.14□□□□□ -0.15
VRK3-219ENST00000600137 TDGF1P13385 188 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 RHOQP17081 205 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 SEC13P55735 322 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 DPYSL2Q16555 572 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 PTPRNQ16849 979 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 PLEKHG6Q3KR16 790 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 PREPLQ4J6C6 727 aaPredicted RBP14.14□□□□□ -0.15
VRK3-219ENST00000600137 C2orf27AQ580R0 203 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 EFHC2Q5JST6 749 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 EGFLAMQ63HQ2 1017 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 LRRC31Q6UY01 552 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 ANKS1BQ7Z6G8 1248 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 SPEM1Q8N4L4 309 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 RPLP0P6Q8NHW5 317 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 KCNV2Q8TDN2 545 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 TEKT4Q8WW24 435 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 SORCS1Q8WY21 1168 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 TSC1Q92574 1164 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 MYO19Q96H55 970 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 FEM1AQ9BSK4 669 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 ZYG11BQ9C0D3 744 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 KLC2Q9H0B6 622 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 DHX35Q9H5Z1 703 aaKnown RBP14.14□□□□□ -0.15
VRK3-219ENST00000600137 RETREG1Q9H6L5 497 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 NOL6Q9H6R4 1146 aaKnown RBP14.14□□□□□ -0.15
VRK3-219ENST00000600137 TMEM248Q9NWD8 314 aa14.14□□□□□ -0.15
VRK3-219ENST00000600137 KIAA1522Q9P206 1035 aaPredicted RBP14.14□□□□□ -0.15
VRK3-219ENST00000600137 THAP10Q9P2Z0 257 aaPredicted RBP14.14□□□□□ -0.15
VRK3-219ENST00000600137 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.13□□□□□ -0.15
VRK3-219ENST00000600137 GOLGA6L6A8MZA4 724 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 WASH3PC4AMC7 463 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 SGK1O00141 431 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 ARHGAP6O43182 974 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 TIMM44O43615 452 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 TIE1P35590 1138 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 CSKP41240 450 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 HCAR3P49019 387 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 SATB1Q01826 763 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 ZNF177Q13360 481 aaPredicted RBP14.13□□□□□ -0.15
VRK3-219ENST00000600137 SLC12A1Q13621 1099 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 EIF4HQ15056 248 aaKnown RBP14.13□□□□□ -0.15
VRK3-219ENST00000600137 SMTNL2Q2TAL5 461 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 PITRM1Q5JRX3 1037 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 MBLAC2Q68D91 279 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 TMEM92Q6UXU6 159 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 POLNQ7Z5Q5 900 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 TFAP2DQ7Z6R9 452 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 SETD3Q86TU7 594 aaPredicted RBP14.13□□□□□ -0.15
VRK3-219ENST00000600137 C1orf210Q8IVY1 113 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 ALLCQ8N6M5 410 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 ZNF557Q8N988 423 aaPredicted RBP14.13□□□□□ -0.15
VRK3-219ENST00000600137 CCDC112Q8NEF3 446 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 TPCN2Q8NHX9 752 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 WFIKKN2Q8TEU8 576 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 TBC1D31Q96DN5 1066 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 MRGPRX3Q96LB0 322 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 PSMB7Q99436 277 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 IER2Q9BTL4 223 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 KCNF1Q9H3M0 494 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 GOLPH3Q9H4A6 298 aa14.13□□□□□ -0.15
VRK3-219ENST00000600137 ZWILCHQ9H900 591 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms