RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 PQLC3Q8N755 202 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 RTL3Q8N8U3 475 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 PCDH19Q8TAB3 1148 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 FIBINQ8TAL6 211 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 TTC8Q8TAM2 541 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 WFDC5Q8TCV5 224 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 BHMTQ93088 406 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 RNF25Q96BH1 459 aaPredicted RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 RNF157Q96PX1 679 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 KLC2Q9H0B6 622 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 CATSPERBQ9H7T0 1116 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 STIM2Q9P246 746 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 COL4A3Q01955 1670 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 COL4A2P08572 1712 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 ENC1O14682 589 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 GLULP15104 373 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 AMPD1P23109 780 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 CTHP32929 405 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 SOX9P48436 509 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 MAPKAPK2P49137 400 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 ZNF177Q13360 481 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 FSCBQ5H9T9 825 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 KIAA0907Q7Z7F0 614 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 UBALD2Q8IYN6 164 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 PHTF2Q8N3S3 785 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 OR52K2Q8NGK3 314 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 MSANTD3Q96H12 275 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 CARD9Q9H257 536 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 NOL6Q9H6R4 1146 aaKnown RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 C8orf33Q9H7E9 229 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 NDFIP2Q9NV92 336 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 ETNK2Q9NVF9 386 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 EFR3BQ9Y2G0 817 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 SLC27A6Q9Y2P4 619 aa13.01□□□□□ -0.33
CHMP2A-206ENST00000600118 hCG_1818297A0A087WSY0 165 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 SPECC1L-ADORA2AF8WAN1 911 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 DAPK3O43293 454 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 TULP3O75386 442 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 HLA-FP30511 346 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 SLC6A11P48066 632 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 DNA2P51530 1060 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 ADCY2Q08462 1091 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 ZNF211Q13398 564 aaPredicted RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 PAFAH1B3Q15102 231 aaKnown RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 SLC44A4Q53GD3 710 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 TFDP3Q5H9I0 405 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 AFMIDQ63HM1 303 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 NAIF1Q69YI7 327 aaPredicted RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 SLC9A4Q6AI14 798 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 TXNDC11Q6PKC3 985 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 RALGPS2Q86X27 583 aaPredicted RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 MFN1Q8IWA4 741 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 UMODL1-AS1Q8N2C9 162 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 CARNMT1Q8N4J0 409 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 NPWQ8N729 165 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 NAT16Q8N8M0 369 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 ALG14Q96F25 216 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 XPO6Q96QU8 1125 aaKnown RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 HERPUD2Q9BSE4 406 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 HEBP1Q9NRV9 189 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 DNAJC17Q9NVM6 304 aaKnown RBP13□□□□□ -0.33
CHMP2A-206ENST00000600118 DONSONQ9NYP3 566 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 WNT16Q9UBV4 365 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 MUTYHQ9UIF7 546 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 MFHAS1Q9Y4C4 1052 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 OR51B4Q9Y5P0 310 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 PIAS3Q9Y6X2 628 aa13□□□□□ -0.33
CHMP2A-206ENST00000600118 A0A0A0MRY4 1105 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 ILVBLA1L0T0 632 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 H0Y626 953 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 KCNK3O14649 394 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 TRIM24O15164 1050 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 KRT10P13645 584 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 OR1E1P30953 314 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 CD70P32970 193 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 PLK1P53350 603 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 OXCT1P55809 520 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 AMPD2Q01433 879 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 MESP2Q0VG99 397 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 LMAN2Q12907 356 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 CDH18Q13634 790 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 ODF2Q5BJF6 829 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 C6orf118Q5T5N4 469 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 PAPD7Q5XG87 772 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 NCBP2-AS2Q69YL0 99 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 AADACL2Q6P093 401 aa12.99□□□□□ -0.33
CHMP2A-206ENST00000600118 ZNF783Q6ZMS7 281 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms