RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	CWF19L1	Q69YN2	538 aa	Known RBP	22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	CCDC50	Q8IVM0	306 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	ZNF683	Q8IZ20	524 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	IGSF8	Q969P0	613 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	RPRD1A	Q96P16	312 aa	Predicted RBP	22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	EPAS1	Q99814	870 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	FOXQ1	Q9C009	403 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	MFSD1	Q9H3U5	465 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	DNAJC17	Q9NVM6	304 aa	Known RBP	22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	KLHL11	Q9NVR0	708 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	STIM2	Q9P246	746 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	OR12D3	Q9UGF7	316 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	CLEC4E	Q9ULY5	219 aa		22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	NDRG2	Q9UN36	371 aa	Known RBP	22.62	■■□□□ 1.21
LTBP4-227	ENST00000600026	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026		E9PAM4	449 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	KCNK3	O14649	394 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	KDELR1	P24390	212 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	L1CAM	P32004	1257 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	ARL4A	P40617	200 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	IRAK1	P51617	712 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	NRG1	Q02297	640 aa	Predicted RBP	22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	UBXN2B	Q14CS0	331 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	CA9	Q16790	459 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	PPP6R3	Q5H9R7	873 aa	Predicted RBP	22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	MPP7	Q5T2T1	576 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	RNF43	Q68DV7	783 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	LRRC31	Q6UY01	552 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	CIR1	Q86X95	450 aa	Predicted RBP	22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	PHTF2	Q8N3S3	785 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	FLCN	Q8NFG4	579 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	ZNF592	Q92610	1267 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	ALG3	Q92685	438 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	EXOC4	Q96A65	974 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	KCTD15	Q96SI1	283 aa	Predicted RBP	22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	MAGEB5	Q9BZ81	275 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	PCDH18	Q9HCL0	1135 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	FBRSL1	Q9HCM7	1045 aa	Known RBP	22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	MRPS17	Q9Y2R5	130 aa	Known RBP	22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026	F5	P12259	2224 aa		22.61	■■□□□ 1.21
LTBP4-227	ENST00000600026		H3BRJ5	948 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	TRIM24	O15164	1050 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	HTR7	P34969	479 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	DGKG	P49619	791 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	COPS2	P61201	443 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	C5orf22	Q49AR2	442 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	TMEM196	Q5HYL7	178 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	ARTN	Q5T4W7	220 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	SEL1L2	Q5TEA6	688 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	TTC39B	Q5VTQ0	682 aa	Predicted RBP	22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	PAPD7	Q5XG87	772 aa	Known RBP	22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	FSTL4	Q6MZW2	842 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	PYROXD2	Q8N2H3	581 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	RAPGEF5	Q92565	580 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	RNF25	Q96BH1	459 aa	Predicted RBP	22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	PBK	Q96KB5	322 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	PNKP	Q96T60	521 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	CALN1	Q9BXU9	219 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	CARD9	Q9H257	536 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	RCOR3	Q9P2K3	495 aa	Predicted RBP	22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	DEC1	Q9P2X7	70 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	FBXO10	Q9UK96	956 aa		22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	MTF2	Q9Y483	593 aa	Predicted RBP	22.6	■■□□□ 1.21
LTBP4-227	ENST00000600026	IGLV3-10	A0A075B6K4	115 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	EEF2K	O00418	725 aa	Known RBP	22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	STK25	O00506	426 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	CREB3	O43889	395 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	TCP1	P17987	556 aa	Known RBP	22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	ARSE	P51690	589 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	MESP2	Q0VG99	397 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	MANEAL	Q5VSG8	457 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	GRAMD4	Q6IC98	578 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	VSIG1	Q86XK7	387 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	SUGP1	Q8IWZ8	645 aa	Known RBP	22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	ZNF687	Q8N1G0	1237 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	CARNMT1	Q8N4J0	409 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	PJA1	Q8NG27	643 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	FAM71B	Q8TC56	605 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	WFDC5	Q8TCV5	224 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	PSMB7	Q99436	277 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	ARHGEF4	Q9NR80	690 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	SNX12	Q9UMY4	172 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026	TRIO	O75962	3097 aa		22.59	■■□□□ 1.21
LTBP4-227	ENST00000600026		A0A1B0GVM2	712 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	TCAF2	A6NFQ2	919 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	FAM72C	H0Y354	149 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	DAPK3	O43293	454 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	SRGAP2	O75044	1071 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	LUC7L3	O95232	432 aa	Known RBP	22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	KAT7	O95251	611 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	EGF	P01133	1207 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	CISD3	P0C7P0	127 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	PRLR	P16471	622 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	HCAR3	P49019	387 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	TPI1	P60174	286 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	GRSF1	Q12849	480 aa	Known RBP eCLIP	22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	DPYSL3	Q14195	570 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	ALF	Q53S48	1182 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	FAM72A	Q5TYM5	149 aa		22.58	■■□□□ 1.21
LTBP4-227	ENST00000600026	ASTL	Q6HA08	431 aa	Predicted RBP	22.58	■■□□□ 1.21

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms