RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 RABEPKQ7Z6M1 372 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 METTL3Q86U44 580 aaKnown RBP13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 ZDHHC17Q8IUH5 632 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 AHI1Q8N157 1196 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 MSANTD4Q8NCY6 345 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 C3orf20Q8ND61 904 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 CIPCQ9C0C6 399 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 LACRTQ9GZZ8 138 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 ZDHHC4Q9NPG8 344 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 CACNA2D2Q9NY47 1150 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 SLC12A6Q9UHW9 1150 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 TMEM59LQ9UK28 342 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 HCN2Q9UL51 889 aa13.26□□□□□ -0.29
SH2D3A-208ENST00000599563 PI4KAP42356 2102 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 TSPAN3O60637 253 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 HSF2BPO75031 334 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 DAB1O75553 588 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 CYP1A2P05177 515 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 ATP5BP06576 529 aaKnown RBP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 TMEM253P0C7T8 217 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 TFE3P19532 575 aaPredicted RBP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 WASP42768 502 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 DHPSP49366 369 aaPredicted RBP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 VAV2P52735 878 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 ATXN1P54253 815 aaKnown RBP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 ZNF252P-AS1Q0IIN9 211 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 SPA17Q15506 151 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 RAB6CQ53S08 254 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 PIK3R6Q5UE93 754 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 RNF43Q68DV7 783 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 IL31Q6EBC2 164 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 SLC26A9Q7LBE3 791 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 CPNE8Q86YQ8 564 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 DEFB106AQ8N104 65 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 VCPIP1Q96JH7 1222 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 BTBD6Q96KE9 485 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 BTN2A3PQ96KV6 586 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 FCRL2Q96LA5 508 aaPredicted RBP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 MCEEQ96PE7 176 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 ACOX2Q99424 681 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 RAB6CQ9H0N0 254 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 FBRSQ9HAH7 460 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 OSGEPQ9NPF4 335 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 SALL4Q9UJQ4 1053 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 PLA2G4CQ9UP65 541 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 NAALADL1Q9UQQ1 740 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 INVSQ9Y283 1065 aa13.25□□□□□ -0.29
SH2D3A-208ENST00000599563 KHNYNO15037 678 aaKnown RBP13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 NDUFV2P19404 249 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 BCKDHBP21953 392 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 MAMLD1Q13495 774 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 SF3A2Q15428 464 aaKnown RBP13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 FAM133BQ5BKY9 247 aaKnown RBP13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 SYPL2Q5VXT5 272 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 SERPINA13PQ6UXR4 307 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 KIAA1328Q86T90 577 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 TAC4Q86UU9 113 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 ATP6V0D2Q8N8Y2 350 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 CTNNBL1Q8WYA6 563 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 SLC39A13Q96H72 371 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 SLC2A13Q96QE2 648 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 NUP85Q9BW27 656 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 PRDM16Q9HAZ2 1276 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 CD248Q9HCU0 757 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 EVLQ9UI08 416 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 DUSP10Q9Y6W6 482 aa13.24□□□□□ -0.29
SH2D3A-208ENST00000599563 USP27XA6NNY8 438 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 PJA2O43164 708 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 TBL1XO60907 577 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 TRUB2O95900 331 aaKnown RBP13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 IGLV3-25P01717 112 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 MYBL1P10243 752 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 PABPC1P11940 636 aaKnown RBP13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 POLR2EP19388 210 aaKnown RBP13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 HLA-FP30511 346 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 OXTRP30559 389 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 CCR1P32246 355 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 SCNN1AP37088 669 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 ARHGAP25P42331 645 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 IL12RB1P42701 662 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 LMAN2Q12907 356 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 ZNF234Q14588 700 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 C15orf59Q2T9L4 293 aaPredicted RBP13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 DCAF6Q58WW2 860 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 TTC39BQ5VTQ0 682 aaPredicted RBP13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 LYSMD4Q5XG99 296 aa13.23□□□□□ -0.29
SH2D3A-208ENST00000599563 KIAA1211LQ6NV74 962 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms