RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DMC1Q14565 340 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 ALFQ53S48 1182 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 FSCBQ5H9T9 825 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 MBLAC2Q68D91 279 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 SDE2Q6IQ49 451 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 SYT13Q7L8C5 426 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 KIAA0907Q7Z7F0 614 aaPredicted RBP20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 CHPFQ8IZ52 775 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 BAG1Q99933 345 aaPredicted RBP20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 ZYG11BQ9C0D3 744 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 C2orf42Q9NWW7 574 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 MPP6Q9NZW5 540 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 INTUQ9ULD6 942 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 FANCMQ8IYD8 2048 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 DRGXA6NNA5 263 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 PROB1E7EW31 1015 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 LRCH4O75427 683 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 NTSR1P30989 418 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 WASP42768 502 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 GSDMDP57764 484 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 SLC12A1Q13621 1099 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 TMEM215Q68D42 235 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 RWDD4Q6NW29 188 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 TSSK4Q6SA08 328 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 TFAP2DQ7Z6R9 452 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 ADIPOR2Q86V24 386 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 MAML2Q8IZL2 1156 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 ARFGAP1Q8N6T3 406 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 TBC1D31Q96DN5 1066 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 PPP1R9BQ96SB3 815 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 MAGEB5Q9BZ81 275 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 POLR3BQ9NW08 1133 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 PPARGC1AQ9UBK2 798 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 HCN2Q9UL51 889 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 USP18Q9UMW8 372 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 AP4E1Q9UPM8 1137 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 EPN1Q9Y6I3 576 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 CKAP5Q14008 2032 aa20.24■□□□□ 0.83
SHKBP1-214ENST00000597396 MUC22E2RYF6 1773 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 EIF3CLB5ME19 914 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 FAM72CH0Y354 149 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 SGK1O00141 431 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 NPC1O15118 1278 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 LRIG2O94898 1065 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 NDUFA10O95299 355 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 PAPSS2O95340 614 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 LCA5LO95447 670 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 ATP5BP06576 529 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 RHOCP08134 193 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 CHRM1P11229 460 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 HNRNPLP14866 589 aaKnown RBP eCLIP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 L1CAMP32004 1257 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 PCK1P35558 622 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 CSKP41240 450 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 NBL1P41271 181 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 FUT11Q495W5 492 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 PITRM1Q5JRX3 1037 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 ERMARDQ5T6L9 678 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 FAM72AQ5TYM5 149 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 MANEALQ5VSG8 457 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 DAB2IPQ5VWQ8 1189 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 FAM72DQ6L9T8 149 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 CXorf57Q6NSI4 855 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 FAM72BQ86X60 149 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 RHOT2Q8IXI1 618 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 PYROXD2Q8N2H3 581 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 NIPA2Q8N8Q9 360 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 SLC35G2Q8TBE7 412 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 SORCS1Q8WY21 1168 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 RFFLQ8WZ73 363 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 LMLNQ96KR4 655 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 PEBP4Q96S96 227 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 ACOX2Q99424 681 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 EIF3CQ99613 913 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 EPAS1Q99814 870 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 SNRNP25Q9BV90 132 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 DHX35Q9H5Z1 703 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 OSGEPQ9NPF4 335 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 CACNA2D2Q9NY47 1150 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 THAP10Q9P2Z0 257 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 LCMT1Q9UIC8 334 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 CHD5Q8TDI0 1954 aa20.23■□□□□ 0.83
SHKBP1-214ENST00000597396 NUP205Q92621 2012 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 CREB3O43889 395 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 SP9P0CG40 484 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 HOXB2P14652 356 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 OR1E1P30953 314 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 SSR1P43307 286 aaKnown RBP20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 ZNF234Q14588 700 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 PLEKHG6Q3KR16 790 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 FNDC3BQ53EP0 1204 aaKnown RBP20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 CYB5D2Q8WUJ1 264 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 HHIPQ96QV1 700 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 MUC3BQ9H195 1237 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 INTS6Q9UL03 887 aaKnown RBP20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 PLA2G4CQ9UP65 541 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 PCDHA13Q9Y5I0 950 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 EML5Q05BV3 1969 aa20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 USP34Q70CQ2 3546 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms