RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 AUHQ13825 339 aaKnown RBP15.47■□□□□ 0.07
TRIM28-207ENST00000597136 HADHQ16836 314 aaKnown RBP15.47■□□□□ 0.07
TRIM28-207ENST00000597136 EMC10Q5UCC4 262 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 FBXL22Q6P050 247 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 PKN3Q6P5Z2 889 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 Q6ZS52 159 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 POLNQ7Z5Q5 900 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 CHSY1Q86X52 802 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 IGSF8Q969P0 613 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 NAPGQ99747 312 aaPredicted RBP15.47■□□□□ 0.07
TRIM28-207ENST00000597136 OSBPL6Q9BZF3 934 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 ZDHHC4Q9NPG8 344 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 ARHGEF4Q9NR80 690 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 DEC1Q9P2X7 70 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 VANGL2Q9ULK5 521 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 PCDHA3Q9Y5H8 950 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 GON4LQ3T8J9 2241 aa15.47■□□□□ 0.07
TRIM28-207ENST00000597136 CCDC66A2RUB6 948 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 DDX3YO15523 660 aaKnown RBP15.46■□□□□ 0.07
TRIM28-207ENST00000597136 KAT7O95251 611 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 ADRA1BP35368 520 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 MARCKSL1P49006 195 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 PEX5P50542 639 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 GRSF1Q12849 480 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIM28-207ENST00000597136 ATP13A4Q4VNC1 1196 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 BOLA3Q53S33 107 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 C1orf228Q6PIY5 440 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 CIR1Q86X95 450 aaPredicted RBP15.46■□□□□ 0.07
TRIM28-207ENST00000597136 SUGP1Q8IWZ8 645 aaKnown RBP15.46■□□□□ 0.07
TRIM28-207ENST00000597136 UBL4BQ8N7F7 174 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 ALG3Q92685 438 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 XPO6Q96QU8 1125 aaKnown RBP15.46■□□□□ 0.07
TRIM28-207ENST00000597136 ZWILCHQ9H900 591 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 POLR3BQ9NW08 1133 aaPredicted RBP15.46■□□□□ 0.07
TRIM28-207ENST00000597136 C2orf42Q9NWW7 574 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 HCN2Q9UL51 889 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIM28-207ENST00000597136 ABCA7Q8IZY2 2146 aa15.46■□□□□ 0.07
TRIM28-207ENST00000597136 A0A0A0MRY4 1105 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 PRRT4C9JH25 899 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 KRT7P08729 469 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 DRD1P21728 446 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 HOXC13P31276 330 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 GJC1P36383 396 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 EIF2DP41214 584 aaKnown RBP15.45■□□□□ 0.06
TRIM28-207ENST00000597136 DGKGP49619 791 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 DNA2P51530 1060 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 SEC13P55735 322 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 SMTNL2Q2TAL5 461 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 KCNT1Q5JUK3 1230 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 ERMARDQ5T6L9 678 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 PAPD7Q5XG87 772 aaKnown RBP15.45■□□□□ 0.06
TRIM28-207ENST00000597136 ZNF683Q8IZ20 524 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 PYROXD2Q8N2H3 581 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 TEKT4Q8WW24 435 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 DDX50Q9BQ39 737 aaKnown RBP15.45■□□□□ 0.06
TRIM28-207ENST00000597136 TBC1D3BA6NDS4 549 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 F5H5T6 163 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 FAM72CH0Y354 149 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 RNF40O75150 1001 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 CNTN5O94779 1100 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 APODP05090 189 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 RARAP10276 462 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 NUMBP49757 651 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 GEN1Q17RS7 908 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 FSCBQ5H9T9 825 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 FAM72AQ5TYM5 149 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 RNF43Q68DV7 783 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 GRAMD4Q6IC98 578 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 FAM72DQ6L9T8 149 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 FAM72BQ86X60 149 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 KATNAL2Q8IYT4 538 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 ZNF592Q92610 1267 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 NTAN1Q96AB6 310 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 HAPLN3Q96S86 360 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 SNRNP25Q9BV90 132 aaKnown RBP15.45■□□□□ 0.06
TRIM28-207ENST00000597136 FZD10Q9ULW2 581 aa15.45■□□□□ 0.06
TRIM28-207ENST00000597136 MUC22E2RYF6 1773 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-207ENST00000597136 DOCK9Q9BZ29 2069 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 NCAM2O15394 837 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 SRGAP2O75044 1071 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-207ENST00000597136 HLA-FP30511 346 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 GRIA2P42262 883 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 AIF1P55008 147 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 RWDD2BP57060 319 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 SCAPQ12770 1279 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 MTAPQ13126 283 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 ARL13BQ3SXY8 428 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 C2orf27AQ580R0 203 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 DGKKQ5KSL6 1271 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 MPP7Q5T2T1 576 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 DCAF12L1Q5VU92 463 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 TMEM215Q68D42 235 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 PSTKQ8IV42 348 aaKnown RBP15.44■□□□□ 0.06
TRIM28-207ENST00000597136 CARNMT1Q8N4J0 409 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 TERB1Q8NA31 727 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 HJURPQ8NCD3 748 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-207ENST00000597136 HSPH1Q92598 858 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 C1orf74Q96LT6 269 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms