RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 PROSCO94903 275 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 MOCS3O95396 460 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 KLF8O95600 359 aaPredicted RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 POLR2EP19388 210 aaKnown RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 SSR1P43307 286 aaKnown RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 MRE11P49959 708 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 SATB1Q01826 763 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 DMC1Q14565 340 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 TCEAL1Q15170 157 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 E2F5Q15329 346 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 ANGPT1Q15389 498 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 FUT11Q495W5 492 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 BOLA3Q53S33 107 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 MANEALQ5VSG8 457 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 DAB2IPQ5VWQ8 1189 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 EGFLAMQ63HQ2 1017 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 TMEM215Q68D42 235 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 MBLAC2Q68D91 279 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 CXorf57Q6NSI4 855 aaKnown RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 TRMT11Q7Z4G4 463 aaKnown RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 PSTKQ8IV42 348 aaKnown RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 IL17RCQ8NAC3 791 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 TXNDC5Q8NBS9 432 aaKnown RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 TBC1D31Q96DN5 1066 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 DHX35Q9H5Z1 703 aaKnown RBP14.78□□□□□ -0.04
LIG1-208ENST00000595758 ZDHHC4Q9NPG8 344 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 GPATCH2LQ9NWQ4 482 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 C2orf42Q9NWW7 574 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 AP4E1Q9UPM8 1137 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 TBC1D30Q9Y2I9 924 aa14.78□□□□□ -0.04
LIG1-208ENST00000595758 TMEM110-MUSTN1A8MSY1 372 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 NPC1O15118 1278 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 CREB3O43889 395 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 MTA2O94776 668 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 ATP5BP06576 529 aaKnown RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 HNRNPLP14866 589 aaKnown RBP eCLIP14.77□□□□□ -0.05
LIG1-208ENST00000595758 RHOQP17081 205 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 IL1R2P27930 398 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 CSKP41240 450 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 ARHGAP25P42331 645 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 CSTF1Q05048 431 aaKnown RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 SLC12A1Q13621 1099 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 MESDQ14696 234 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 PITRM1Q5JRX3 1037 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 EOGTQ5NDL2 527 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 C6orf118Q5T5N4 469 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 SDE2Q6IQ49 451 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 SYT13Q7L8C5 426 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 TFAP2DQ7Z6R9 452 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 CHPFQ8IZ52 775 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 MAML2Q8IZL2 1156 aaPredicted RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 SORCS1Q8WY21 1168 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 ACOX2Q99424 681 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 EPAS1Q99814 870 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 SNRNP25Q9BV90 132 aaKnown RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 KCNH6Q9H252 994 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 RETREG1Q9H6L5 497 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 PRMT8Q9NR22 394 aaPredicted RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 POLR3BQ9NW08 1133 aaPredicted RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 THAP10Q9P2Z0 257 aaPredicted RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 FBXO4Q9UKT5 387 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 INTS6Q9UL03 887 aaKnown RBP14.77□□□□□ -0.05
LIG1-208ENST00000595758 MMP17Q9ULZ9 603 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 PLA2G4CQ9UP65 541 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 SLC8A2Q9UPR5 921 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 HCN4Q9Y3Q4 1203 aa14.77□□□□□ -0.05
LIG1-208ENST00000595758 SGK1O00141 431 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 PAPSS2O95340 614 aaPredicted RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 RHOCP08134 193 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 DLDP09622 509 aaKnown RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 TCF4P15884 667 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 MZF1P28698 734 aaPredicted RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 EPHB2P29323 1055 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 OR1E1P30953 314 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 NTSR1P30989 418 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 MAN1A1P33908 653 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 WASP42768 502 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 NOP2P46087 812 aaKnown RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 PLK1P53350 603 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 SEMA3BQ13214 749 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 CA9Q16790 459 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 HADHQ16836 314 aaKnown RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 PLEKHG6Q3KR16 790 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 RNF219Q5W0B1 726 aaPredicted RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 CYP4V2Q6ZWL3 525 aaPredicted RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 SETD3Q86TU7 594 aaPredicted RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 APCDD1Q8J025 514 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 ACRBPQ8NEB7 543 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 PRSS33Q8NF86 280 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 CYB5D2Q8WUJ1 264 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 ANP32BQ92688 251 aaKnown RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 TTC17Q96AE7 1141 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 FEM1AQ9BSK4 669 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 ZWILCHQ9H900 591 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 CACNA2D2Q9NY47 1150 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 ZNF212Q9UDV6 495 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 TFR2Q9UP52 801 aa14.76□□□□□ -0.05
LIG1-208ENST00000595758 REXO2Q9Y3B8 237 aaKnown RBP14.76□□□□□ -0.05
LIG1-208ENST00000595758 MYO18AQ92614 2054 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms