RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 DEFB106AQ8N104 65 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 MYO19Q96H55 970 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 PPP1R13BQ96KQ4 1090 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 MRGPRX3Q96LB0 322 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 FAM81BQ96LP2 452 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 TMEM121BQ9BXQ6 578 aaPredicted RBP18.54■□□□□ 0.56
CIRBP-243ENST00000593128 SYNCQ9H7C4 482 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 DDIT4Q9NX09 232 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 APEX2Q9UBZ4 518 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 SLCO3A1Q9UIG8 710 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 PCOLCE2Q9UKZ9 415 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 ANKRD6Q9Y2G4 727 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 AKAP13Q12802 2813 aa18.54■□□□□ 0.56
CIRBP-243ENST00000593128 TMEM8BA6NDV4 472 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 PLXNA2O75051 1894 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 PDGFRAP16234 1089 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 STK19P49842 368 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-243ENST00000593128 IL9RQ01113 521 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 NME3Q13232 169 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 CST6Q15828 149 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 CCDC157Q569K6 752 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 HSP90AA4PQ58FG1 418 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 KIAA0895LQ68EN5 471 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 LRSAM1Q6UWE0 723 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 BEND5Q7L4P6 421 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 KDF1Q8NAX2 398 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-243ENST00000593128 C1orf131Q8NDD1 294 aaKnown RBP18.53■□□□□ 0.56
CIRBP-243ENST00000593128 C1orf216Q8TAB5 229 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 RHBDD1Q8TEB9 315 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 CPXM1Q96SM3 734 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 SERGEFQ9UGK8 458 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 APOBEC2Q9Y235 224 aaKnown RBP18.53■□□□□ 0.56
CIRBP-243ENST00000593128 ASPMQ8IZT6 3477 aa18.53■□□□□ 0.56
CIRBP-243ENST00000593128 TP53BP1Q12888 1972 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 EDDM13A0A1B0GTR0 161 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 KCNU1A8MYU2 1149 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 PES1O00541 588 aaKnown RBP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 SRPRAP08240 638 aaKnown RBP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 PNMA6AP0CW24 399 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 CD27P26842 260 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 PON1P27169 355 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 SLC8A1P32418 973 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 KRT9P35527 623 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 NNMTP40261 264 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 C21orf59P57076 290 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 PTK2Q05397 1052 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 SFSWAPQ12872 951 aaKnown RBP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 MEA1Q16626 185 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 RABGAP1LQ5R372 815 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 C9orf64Q5T6V5 341 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 NCEH1Q6PIU2 408 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 FAM183BPQ6ZVS7 135 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 RAB44Q7Z6P3 723 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 STK40Q8N2I9 435 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 WDTC1Q8N5D0 677 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 NOX5Q96PH1 765 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 NEUROG2Q9H2A3 272 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 PLCB1Q9NQ66 1216 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 AJAP1Q9UKB5 411 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-243ENST00000593128 SCML1Q9UN30 329 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 CFAP47Q6ZTR5 3102 aa18.52■□□□□ 0.56
CIRBP-243ENST00000593128 WDFY3Q8IZQ1 3526 aa18.52■□□□□ 0.55
CIRBP-243ENST00000593128 HSF2BPO75031 334 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 IL1BP01584 269 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 IGLV3-25P01717 112 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 MZF1P28698 734 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-243ENST00000593128 CCR1P32246 355 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 GGCXP38435 758 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 CENPCQ03188 943 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 SUZ12Q15022 739 aaKnown RBP18.51■□□□□ 0.55
CIRBP-243ENST00000593128 ACCSLQ4AC99 568 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 EFHC1Q5JVL4 640 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 USP30Q70CQ3 517 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 CCAR2Q8N163 923 aaKnown RBP18.51■□□□□ 0.55
CIRBP-243ENST00000593128 SLC6A18Q96N87 628 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 RPRD1AQ96P16 312 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-243ENST00000593128 AASDHPPTQ9NRN7 309 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
CIRBP-243ENST00000593128 TARSL2A2RTX5 802 aaKnown RBP18.5■□□□□ 0.55
CIRBP-243ENST00000593128 LRRC72A6NJI9 287 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 FLRT2O43155 660 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 ERBB2P04626 1255 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 IGHV4-34P06331 123 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 ZNF883P0CG24 379 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 SLC2A3P11169 496 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 PRKCSHP14314 528 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-243ENST00000593128 VAV1P15498 845 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 GRIA4P48058 902 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 GALCP54803 685 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 RNASE9P60153 205 aaKnown RBP18.5■□□□□ 0.55
CIRBP-243ENST00000593128 KCNT1Q5JUK3 1230 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 C11orf57Q6ZUT1 292 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-243ENST00000593128 SLCO6A1Q86UG4 719 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 SLC47A2Q86VL8 602 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 MLKLQ8NB16 471 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 OR14C36Q8NHC7 312 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 SHC3Q92529 594 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 ACE2Q9BYF1 805 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms