RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CPXM1Q96SM3 734 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 PRMT1Q99873 361 aaKnown RBP13.72□□□□□ -0.21
APOC1-209ENST00000592885 TM9SF3Q9HD45 589 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 TM7SF3Q9NS93 570 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 ADAMTS1Q9UHI8 967 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 DACH1Q9UI36 760 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 PCOLCE2Q9UKZ9 415 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 CEP83Q9Y592 693 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 TP53BP1Q12888 1972 aaPredicted RBP13.72□□□□□ -0.21
APOC1-209ENST00000592885 CBFA2T3O75081 653 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 DAB1O75553 588 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 TOP3BO95985 862 aaKnown RBP13.71□□□□□ -0.21
APOC1-209ENST00000592885 ADH1BP00325 375 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 SPINK2P20155 84 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 NNMTP40261 264 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 USP8P40818 1118 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
APOC1-209ENST00000592885 PLK1P53350 603 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 FAM193AP78312 1265 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 BNC1Q01954 994 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 NUMA1Q14980 2115 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 SUZ12Q15022 739 aaKnown RBP13.71□□□□□ -0.21
APOC1-209ENST00000592885 CST6Q15828 149 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 HLA-BQ31612 363 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 FSCBQ5H9T9 825 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 C9orf64Q5T6V5 341 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 KIAA0895LQ68EN5 471 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 DBX2Q6ZNG2 339 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 SLC26A9Q7LBE3 791 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 ZDHHC17Q8IUH5 632 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 CFAP52Q8N1V2 620 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 ZNF397Q8NF99 534 aaPredicted RBP13.71□□□□□ -0.21
APOC1-209ENST00000592885 BAHD1Q8TBE0 780 aaPredicted RBP13.71□□□□□ -0.21
APOC1-209ENST00000592885 ADAMTS14Q8WXS8 1223 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 BIRC7Q96CA5 298 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 ACP6Q9NPH0 428 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 DDIT4Q9NX09 232 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 RRN3Q9NYV6 651 aa13.71□□□□□ -0.21
APOC1-209ENST00000592885 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.21
APOC1-209ENST00000592885 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.21
APOC1-209ENST00000592885 PLXNA2O75051 1894 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 TMEM131Q92545 1883 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 A0A1B0GVT2 93 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 LRRC72A6NJI9 287 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 DFNA5O60443 496 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 FSBPO95073 299 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 FTH1P19P0C7X4 201 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 KRT9P35527 623 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 BPIFB4P59827 614 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 RACK1P63244 317 aaKnown RBP13.7□□□□□ -0.22
APOC1-209ENST00000592885 ELAVL3Q14576 367 aaKnown RBP13.7□□□□□ -0.22
APOC1-209ENST00000592885 OLFML1Q6UWY5 402 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 FAM183BPQ6ZVS7 135 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 CREBRFQ8IUR6 639 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 DHX40Q8IX18 779 aaKnown RBP13.7□□□□□ -0.22
APOC1-209ENST00000592885 DEFB106AQ8N104 65 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 CCAR2Q8N163 923 aaKnown RBP13.7□□□□□ -0.22
APOC1-209ENST00000592885 WDTC1Q8N5D0 677 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 C1orf131Q8NDD1 294 aaKnown RBP13.7□□□□□ -0.22
APOC1-209ENST00000592885 OR2T34Q8NGX1 318 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 GANCQ8TET4 914 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 IGSF8Q969P0 613 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 CAMK1GQ96NX5 476 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 CDC6Q99741 560 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 CLSTN2Q9H4D0 955 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 IL21RQ9HBE5 538 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 SIX2Q9NPC8 291 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 FBXL12Q9NXK8 326 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 CHMP5Q9NZZ3 219 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 DNAJC12Q9UKB3 198 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 KLK13Q9UKR3 277 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 ZMIZ1Q9ULJ6 1067 aa13.7□□□□□ -0.22
APOC1-209ENST00000592885 FNDC3AQ9Y2H6 1198 aaKnown RBP13.7□□□□□ -0.22
APOC1-209ENST00000592885 A0A1W2PPC4 97 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 TTC34A8MYJ7 566 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 C10orf142B7Z368 130 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 MID1O15344 667 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 IGHV4-34P06331 123 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 C5AR1P21730 350 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 ERCC5P28715 1186 aaPredicted RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 NOS2P35228 1153 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 SCNN1AP37088 669 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 CTSOP43234 321 aaPredicted RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 CSNK1EP49674 416 aaKnown RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 CCT8P50990 548 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 PITX1P78337 314 aaPredicted RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 TAF5Q15542 800 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 KIF19Q2TAC6 998 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 INAVAQ3KP66 663 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 CT47A1Q5JQC4 288 aaPredicted RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 ACBD5Q5T8D3 534 aaPredicted RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 CXorf57Q6NSI4 855 aaKnown RBP13.69□□□□□ -0.22
APOC1-209ENST00000592885 MMS22LQ6ZRQ5 1243 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.225e-25■■■■□ 21
APOC1-209ENST00000592885 DSG4Q86SJ6 1040 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 PASD1Q8IV76 773 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
APOC1-209ENST00000592885 APCDD1Q8J025 514 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms