RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 TLR1Q15399 786 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 SH3D19Q5HYK7 790 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 SPATA24Q86W54 205 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 NT5DC4Q86YG4 428 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 CERS2Q96G23 380 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 LENG8Q96PV6 779 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 YIPF2Q9BWQ6 316 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 UBE2OQ9C0C9 1292 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 MFHAS1Q9Y4C4 1052 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 CAPN8A6NHC0 703 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 G3V2L1 256 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 SCNN1AP37088 669 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 PHKA2P46019 1235 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 PABPC1LQ4VXU2 614 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 SPANXN3Q5MJ09 141 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 ACOT1Q86TX2 421 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 DCLK2Q8N568 766 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 MAPK15Q8TD08 544 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 CNDP1Q96KN2 507 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 PRICKLE1Q96MT3 831 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 LGMNQ99538 433 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 OXCT2Q9BYC2 517 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 VPS28Q9UK41 221 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 CITO14578 2027 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 TXNDC9O14530 226 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 PEX10O60683 326 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 HSPA4LO95757 839 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 ERVK-10P10266 1014 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 THRAP10827 490 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 NAT1P18440 290 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 RGS2P41220 211 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 NAPRTQ6XQN6 538 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 PLD6Q8N2A8 252 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 CCDC185Q8N715 623 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 B4GALNT2Q8NHY0 566 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 KLRG1Q96E93 195 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 DCUN1D1Q96GG9 259 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 SERPINI1Q99574 410 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 RBBP8Q99708 897 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 MAN1C1Q9NR34 630 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 RCOR3Q9P2K3 495 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 E9PBE3 544 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 F5H423 210 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 KLHL41O60662 606 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 DNAJA2O60884 412 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 STK10O94804 968 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 PENKP01210 267 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 GOT1P17174 413 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 GMPRP36959 345 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 MLH1P40692 756 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 RPL5P46777 297 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 GLUD2P49448 558 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 SERPINB8P50452 374 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 R3HDM1Q15032 1099 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 CMC1Q7Z7K0 106 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 CLEC14AQ86T13 490 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 MICALL2Q8IY33 904 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 MRPL45Q9BRJ2 306 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 SMARCAD1Q9H4L7 1026 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 PIH1D1Q9NWS0 290 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 ATXN10Q9UBB4 475 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 RAB26Q9ULW5 256 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 SCN1AP35498 2009 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 RGSL1A5PLK6 1076 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 RNF103O00237 685 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 SPRP35270 261 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 TNS4Q8IZW8 715 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 P2RY11Q96G91 374 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 CPB2Q96IY4 423 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 Q9H521 79 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 TCF7L2Q9NQB0 619 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 FAM49BQ9NUQ9 324 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 NME7Q9Y5B8 376 aa15.2■□□□□ 0.02
SMARCA4-219ENST00000592604 ZSWIM8A7E2V4 1837 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 SOCS7O14512 581 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 TRIM13O60858 407 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 H2AFYO75367 372 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 OR6B1O95007 311 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 C22orf31O95567 290 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 MPOP05164 745 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 TFAP2AP05549 437 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 ARF4P18085 180 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 ARL4AP40617 200 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 RPL34P49207 117 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 LIMK2P53671 638 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 MAP7Q14244 749 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 FRG1Q14331 258 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 SOWAHAQ2M3V2 549 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 PRAMEF18Q5VWM3 479 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 ARHGAP17Q68EM7 881 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 C16orf89Q6UX73 402 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 STRADAQ7RTN6 431 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 TICAM1Q8IUC6 712 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 SLC7A14Q8TBB6 771 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 CLEC4CQ8WTT0 213 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 FCRL3Q96P31 734 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 OR52B2Q96RD2 323 aa15.19■□□□□ 0.02
SMARCA4-219ENST00000592604 PLK2Q9NYY3 685 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms