RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZNF217O75362 1048 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 RETP07949 1114 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 RHOCP08134 193 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 HLA-EP13747 358 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 GABRG2P18507 467 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 RRM1P23921 792 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 PSMA2P25787 234 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 CASP14P31944 242 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 ADRA1BP35368 520 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 CDH4P55283 916 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 ECT2LQ008S8 904 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 SULT2A1Q06520 285 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 FUT11Q495W5 492 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 FSCBQ5H9T9 825 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 PITRM1Q5JRX3 1037 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 OTUD1Q5VV17 481 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-227ENST00000591849 SPECC1LQ69YQ0 1117 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 KIAA1211LQ6NV74 962 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 RWDD4Q6NW29 188 aaKnown RBP10.38□□□□□ -0.75
BRCA1-227ENST00000591849 LPCAT2Q7L5N7 544 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 STRADAQ7RTN6 431 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 ADIPOR2Q86V24 386 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 KBTBD6Q86V97 674 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 DCLK2Q8N568 766 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 FAM160A2Q8N612 972 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-227ENST00000591849 GPR161Q8N6U8 529 aaKnown RBP10.38□□□□□ -0.75
BRCA1-227ENST00000591849 GANCQ8TET4 914 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 PRCCQ92733 491 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-227ENST00000591849 IGSF8Q969P0 613 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 ZNF653Q96CK0 615 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 C1orf74Q96LT6 269 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 PRMT1Q99873 361 aaKnown RBP10.38□□□□□ -0.75
BRCA1-227ENST00000591849 CNPY3Q9BT09 278 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 DEF6Q9H4E7 631 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 PRDM16Q9HAZ2 1276 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 CALCOCO1Q9P1Z2 691 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 CNOT8Q9UFF9 292 aaKnown RBP10.38□□□□□ -0.75
BRCA1-227ENST00000591849 ADAMTS1Q9UHI8 967 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 GPR179Q6PRD1 2367 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 ITIH6Q6UXX5 1313 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 A0A1W2PQF6 199 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 E9PAM4 449 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 RNASEH1O60930 286 aaKnown RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 RNF8O76064 485 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 ENDOD1O94919 500 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SRPRAP08240 638 aaKnown RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 MYBL1P10243 752 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 PRKCHP24723 683 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 OR1E1P30953 314 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 DHPSP49366 369 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 NUMBP49757 651 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 ZNF143P52747 638 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 GSCP56915 257 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 KRT83P78385 493 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 PLEKHG6Q3KR16 790 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 PLK5Q496M5 336 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 ACCSLQ4AC99 568 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 EFHC2Q5JST6 749 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SH3PXD2AQ5TCZ1 1133 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 E4F1Q66K89 784 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 TRNP1Q6NT89 227 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SLC36A4Q6YBV0 504 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 KIAA0907Q7Z7F0 614 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SLFN11Q7Z7L1 901 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 DNAAF5Q86Y56 855 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 TMPRSS6Q8IU80 811 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 APCDD1Q8J025 514 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 ZNF366Q8N895 744 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 OR8K1Q8NGG5 319 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 TTC17Q96AE7 1141 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SIPA1Q96FS4 1042 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 LOXL4Q96JB6 756 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SPON2Q9BUD6 331 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 ZYG11BQ9C0D3 744 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 MRPL47Q9HD33 250 aaKnown RBP10.37□□□□□ -0.75
BRCA1-227ENST00000591849 TMPRSS4Q9NRS4 437 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 OR12D3Q9UGF7 316 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SLC25A13Q9UJS0 675 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 VPS28Q9UK41 221 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 CYP8B1Q9UNU6 501 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 ERVW-1Q9UQF0 538 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 SCINQ9Y6U3 715 aa10.37□□□□□ -0.75
BRCA1-227ENST00000591849 DRGXA6NNA5 263 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 CCP110O43303 1012 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 CNTN5O94779 1100 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 GYPCP04921 128 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 PLEKP08567 350 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 CHRM1P11229 460 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 NDUFV2P19404 249 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 MZF1P28698 734 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 P2RY2P41231 377 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 RPL7AP62424 266 aaKnown RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 RPL6Q02878 288 aaKnown RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 CREB5Q02930 508 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 SPEM2Q0P670 501 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 SFSWAPQ12872 951 aaKnown RBP10.36□□□□□ -0.75
BRCA1-227ENST00000591849 MAMLD1Q13495 774 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 CCDC122Q5T0U0 273 aa10.36□□□□□ -0.75
BRCA1-227ENST00000591849 C6orf118Q5T5N4 469 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms