RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CCNI2Q6ZMN8 369 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 ADAT2Q7Z6V5 191 aaKnown RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 CHSY1Q86X52 802 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 MMAAQ8IVH4 418 aaKnown RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 APCDD1Q8J025 514 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 IGSF8Q969P0 613 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 BTN2A3PQ96KV6 586 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 MED15Q96RN5 788 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 TOR4AQ9NXH8 423 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 TJP2Q9UDY2 1190 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 CEP83Q9Y592 693 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 TMEM131Q92545 1883 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 DMXL2Q8TDJ6 3036 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 A0A1W2PP55 124 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 TARSL2A2RTX5 802 aaKnown RBP22.5■■□□□ 1.19
DDX39A-215ENST00000590696 IGLV3-25P01717 112 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 ATXN1LP0C7T5 689 aaKnown RBP22.5■■□□□ 1.19
DDX39A-215ENST00000590696 PITX1P78337 314 aaPredicted RBP22.5■■□□□ 1.19
DDX39A-215ENST00000590696 ECT2LQ008S8 904 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 GJB7Q6PEY0 223 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 PROSER1Q86XN7 944 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 NEUROG2Q9H2A3 272 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 THAP9Q9H5L6 903 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 SLCO3A1Q9UIG8 710 aa22.5■■□□□ 1.19
DDX39A-215ENST00000590696 EDDM13A0A1B0GTR0 161 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 A0A1W2PPC4 97 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 GOLGA8CPA6NN73 597 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 H0Y8X5 98 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 RNASEH2AO75792 299 aaKnown RBP22.49■■□□□ 1.19
DDX39A-215ENST00000590696 FGFR1OPO95684 399 aaKnown RBP22.49■■□□□ 1.19
DDX39A-215ENST00000590696 SLC8A1P32418 973 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 CTSKP43235 329 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 TAF5Q15542 800 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 RNF219Q5W0B1 726 aaPredicted RBP22.49■■□□□ 1.19
DDX39A-215ENST00000590696 NCEH1Q6PIU2 408 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 ENOSF1Q7L5Y1 443 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 ATP6V0D2Q8N8Y2 350 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 RPL10LQ96L21 214 aaKnown RBP22.49■■□□□ 1.19
DDX39A-215ENST00000590696 FAM129BQ96TA1 746 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 OMDQ99983 421 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 CRACR2AQ9BSW2 395 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.49■■□□□ 1.197e-6■□□□□ 10.1
DDX39A-215ENST00000590696 ITIH6Q6UXX5 1313 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 PLXNB3Q9ULL4 1909 aa22.49■■□□□ 1.19
DDX39A-215ENST00000590696 KCNU1A8MYU2 1149 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 F5H5T6 163 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 USP8P40818 1118 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 CCT8P50990 548 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 RACK1P63244 317 aaKnown RBP22.48■■□□□ 1.19
DDX39A-215ENST00000590696 PDCLQ13371 301 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 EIF4EBP2Q13542 120 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-215ENST00000590696 ARHGAP44Q17R89 818 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 TRIM65Q6PJ69 517 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 CREBRFQ8IUR6 639 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 PTPRN2Q92932 1015 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 ACE2Q9BYF1 805 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-215ENST00000590696 EBF2Q9HAK2 575 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 ADAMTS1Q9UHI8 967 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 SLC12A6Q9UHW9 1150 aa22.48■■□□□ 1.19
DDX39A-215ENST00000590696 LRRC72A6NJI9 287 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 BECN2A8MW95 431 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 PCDHGA12O60330 932 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 SLC9A1P19634 815 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 GRK6P43250 576 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 PSMD8P48556 350 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 NUMBP49757 651 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 STK19P49842 368 aaPredicted RBP22.47■■□□□ 1.19
DDX39A-215ENST00000590696 C21orf59P57076 290 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 IL9RQ01113 521 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 TMPRSS7Q7RTY8 843 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 CCAR2Q8N163 923 aaKnown RBP22.47■■□□□ 1.19
DDX39A-215ENST00000590696 STK40Q8N2I9 435 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 OR2T34Q8NGX1 318 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 SLC6A18Q96N87 628 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 PRMT1Q99873 361 aaKnown RBP22.47■■□□□ 1.19
DDX39A-215ENST00000590696 FZD4Q9ULV1 537 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 PLXNA2O75051 1894 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 PTPRBP23467 1997 aa22.47■■□□□ 1.19
DDX39A-215ENST00000590696 FAM208BQ5VWN6 2430 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 FREM2Q5SZK8 3169 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 SYNJ2BP-COX16A0A087WUM0 186 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 VILLO15195 856 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 DKK1O94907 266 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 NNMTP40261 264 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 CDK17Q00537 523 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 APBA1Q02410 837 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 SLC12A1Q13621 1099 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 LRSAM1Q6UWE0 723 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 SND1Q7KZF4 910 aaKnown RBP eCLIP22.46■■□□□ 1.19
DDX39A-215ENST00000590696 CIR1Q86X95 450 aaPredicted RBP22.46■■□□□ 1.19
DDX39A-215ENST00000590696 DEFB106AQ8N104 65 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 WDTC1Q8N5D0 677 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 AADATQ8N5Z0 425 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 FAM81BQ96LP2 452 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 CCDC86Q9H6F5 360 aaKnown RBP22.46■■□□□ 1.19
DDX39A-215ENST00000590696 FAM204AQ9H8W3 233 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 COX16Q9P0S2 106 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 LHX6Q9UPM6 363 aa22.46■■□□□ 1.19
DDX39A-215ENST00000590696 TNFSF14O43557 240 aa22.45■■□□□ 1.18
DDX39A-215ENST00000590696 DFNA5O60443 496 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms