RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TMA16Q96EY4 203 aaKnown RBP6.72□□□□□ -1.33
DNMT1-222ENST00000590619 ANKRD36BP1Q96IX9 119 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 LMLNQ96KR4 655 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 MRGPRX3Q96LB0 322 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 NOX5Q96PH1 765 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 STRA6Q9BX79 667 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 RAB34Q9BZG1 259 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 DCLK3Q9C098 648 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 ST6GALNAC4Q9H4F1 302 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 ZHX3Q9H4I2 956 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 CSNK1G1Q9HCP0 422 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 PREBQ9HCU5 417 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 DMAP1Q9NPF5 467 aaPredicted RBP6.72□□□□□ -1.33
DNMT1-222ENST00000590619 DONSONQ9NYP3 566 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 FOXJ2Q9P0K8 574 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 PISDQ9UG56 409 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 SALL4Q9UJQ4 1053 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 GGA2Q9UJY4 613 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 R3HCC1Q9Y3T6 440 aaKnown RBP6.72□□□□□ -1.33
DNMT1-222ENST00000590619 COL27A1Q8IZC6 1860 aaPredicted RBP6.72□□□□□ -1.33
DNMT1-222ENST00000590619 SDK2Q58EX2 2172 aa6.72□□□□□ -1.33
DNMT1-222ENST00000590619 TDRD6O60522 2096 aaKnown RBP6.72□□□□□ -1.33
DNMT1-222ENST00000590619 RP1L1Q8IWN7 2480 aaPredicted RBP6.71□□□□□ -1.33
DNMT1-222ENST00000590619 TARSL2A2RTX5 802 aaKnown RBP6.71□□□□□ -1.34
DNMT1-222ENST00000590619 PRR19A6NJB7 356 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 TTC34A8MYJ7 566 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 HHLA1C9JL84 531 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 K7EM74 188 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 MUSKO15146 869 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 SLC31A1O15431 190 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 JAK2O60674 1132 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 LDHAP00338 332 aaKnown RBP6.71□□□□□ -1.34
DNMT1-222ENST00000590619 ITIH1P19827 911 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 CD70P32970 193 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 ABCD1P33897 745 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 NUDT1P36639 197 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 ETV5P41161 510 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 TRIM29Q14134 588 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 SPIDRQ14159 915 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 DHX8Q14562 1220 aaKnown RBP6.71□□□□□ -1.34
DNMT1-222ENST00000590619 ARID5BQ14865 1188 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 NR0B2Q15466 257 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 WDR72Q3MJ13 1102 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 DTHD1Q6ZMT9 781 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 TRAPPC11Q7Z392 1133 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 GPBP1Q86WP2 473 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 SKAP1Q86WV1 359 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 HEATR4Q86WZ0 1026 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 FAM114A1Q8IWE2 563 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 AHI1Q8N157 1196 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 SLC22A18ASQ8N1D0 253 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 STK40Q8N2I9 435 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 OR13H1Q8NG92 308 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 WFDC5Q8TCV5 224 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 JPH3Q8WXH2 748 aaPredicted RBP6.71□□□□□ -1.34
DNMT1-222ENST00000590619 KLK6Q92876 244 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 USP7Q93009 1102 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 FAM131CQ96AQ9 280 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 MOCOSQ96EN8 888 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 IFT43Q96FT9 208 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 SMARCD1Q96GM5 515 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 FOXP3Q9BZS1 431 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 TM6SF1Q9BZW5 370 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 PCIF1Q9H4Z3 704 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 EPB41L5Q9HCM4 733 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 SLCO3A1Q9UIG8 710 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 KLF15Q9UIH9 416 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 CSNK1G3Q9Y6M4 447 aa6.71□□□□□ -1.34
DNMT1-222ENST00000590619 TP53BP1Q12888 1972 aaPredicted RBP6.71□□□□□ -1.34
DNMT1-222ENST00000590619 A0A1W2PQ27 194 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 A0A1W2PQ64 194 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 A0A1W2PQC6 194 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 C9orf172C9J069 976 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 TMX2-CTNND1H3BSU7 103 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 AGRPO00253 132 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 TPP1O14773 563 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 NKX2-8O15522 239 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 PLRG1O43660 514 aaKnown RBP6.7□□□□□ -1.34
DNMT1-222ENST00000590619 RNGTTO60942 597 aaKnown RBP6.7□□□□□ -1.34
DNMT1-222ENST00000590619 PPP1R37O75864 691 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 PRPF6O94906 941 aaKnown RBP6.7□□□□□ -1.34
DNMT1-222ENST00000590619 IL1BP01584 269 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 TNNC2P02585 160 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 CSF2P04141 144 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 JMJD7P0C870 316 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 PSMD8P48556 350 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 SGSHP51688 502 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 CLDN2P57739 230 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 ST8SIA6P61647 398 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 HNRNPKP61978 463 aaKnown RBP eCLIP6.7□□□□□ -1.34
DNMT1-222ENST00000590619 EFEMP1Q12805 493 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 GNL2Q13823 731 aaKnown RBP6.7□□□□□ -1.34
DNMT1-222ENST00000590619 EIF2S3LQ2VIR3 472 aaKnown RBP6.7□□□□□ -1.34
DNMT1-222ENST00000590619 DEFB133Q30KQ1 61 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 TMEM119Q4V9L6 283 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 Q6ZSR6 202 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 TRIM69Q86WT6 500 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 TEX19Q8NA77 164 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 WDR48Q8TAF3 677 aa6.7□□□□□ -1.34
DNMT1-222ENST00000590619 PTPRN2Q92932 1015 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms