RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 BST1Q10588 318 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 TUSC3Q13454 348 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 PRPSAP1Q14558 356 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 DSC3Q14574 896 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 KRT72Q14CN4 511 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 EDEM1Q92611 657 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 SKA1Q96BD8 255 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 CERS2Q96G23 380 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 NSL1Q96IY1 281 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 ANLNQ9NQW6 1124 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 ADAM28Q9UKQ2 775 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 RPS6KL1Q9Y6S9 549 aa19.64■□□□□ 0.73
PRKCSH-209ENST00000589838 CCDC22O60826 627 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 BDNFP23560 247 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 DNAJB2P25686 324 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 EPHB2P29323 1055 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 GP5P40197 560 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 TSPY1Q01534 308 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 STX3Q13277 289 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 CTC1Q2NKJ3 1217 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 TEX44Q53QW1 395 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 FAM91A1Q658Y4 838 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 SAPCD2Q86UD0 394 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 OR52K1Q8NGK4 314 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 PAAF1Q9BRP4 392 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 CASS4Q9NQ75 786 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 VANGL2Q9ULK5 521 aa19.63■□□□□ 0.73
PRKCSH-209ENST00000589838 CBX6O95503 412 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 ITGA2BP08514 1039 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 MYL2P10916 166 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 HTR7P34969 479 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 OCRLQ01968 901 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 LONP2Q86WA8 852 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TP53INP2Q8IXH6 220 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 UNC5BQ8IZJ1 945 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 DNAAF3Q8N9W5 541 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 PPP1R14CQ8TAE6 165 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TRIB2Q92519 343 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 SIKE1Q9BRV8 207 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TACO1Q9BSH4 297 aaKnown RBP19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 MECRQ9BV79 373 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TBC1D10AQ9BXI6 508 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TLE6Q9H808 572 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 THAP1Q9NVV9 213 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 I6L893 689 aaPredicted RBP19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 ZBTB24O43167 697 aaPredicted RBP19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 SNNO75324 88 aaPredicted RBP19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 USP1O94782 785 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 POMCP01189 267 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 CTGFP29279 349 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 SERPINB3P29508 390 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 SPRP35270 261 aaPredicted RBP19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TAC4Q86UU9 113 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 UTP4Q969X6 686 aaKnown RBP19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TBC1D31Q96DN5 1066 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 AGAP3Q96P47 875 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 WWP1Q9H0M0 922 aa19.62■□□□□ 0.73
PRKCSH-209ENST00000589838 TPP1O14773 563 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 LRIG2O94898 1065 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 TYMPP19971 482 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 BRCC3P46736 316 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 BRMS1LQ5PSV4 323 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 KCTD11Q693B1 232 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 OVOS1Q6IE37 1185 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 NPWQ8N729 165 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 DQX1Q8TE96 717 aaKnown RBP19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 AGAP11Q8TF27 550 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 RSPH1Q8WYR4 309 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 PKMYT1Q99640 499 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 ADAM2Q99965 735 aa19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 PIH1D1Q9NWS0 290 aaKnown RBP19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 COL4A4P53420 1690 aaPredicted RBP19.61■□□□□ 0.73
PRKCSH-209ENST00000589838 CA12O43570 354 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 MGEA5O60502 916 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ADAMTS4O75173 837 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ALDOAP04075 364 aaKnown RBP19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ASGR1P07306 291 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 CALB2P22676 271 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 PDE1CQ14123 709 aaPredicted RBP19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 E2F5Q15329 346 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 FASTKD1Q53R41 847 aaKnown RBP19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 WASHC2DQ5SRD0 308 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 C4orf50Q6ZRC1 276 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 LINC00523Q86TU6 105 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 TMEM135Q86UB9 458 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 SUSD3Q96L08 255 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 TEKT5Q96M29 485 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 TSGA13Q96PP4 275 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 HAPLN3Q96S86 360 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 RHOBTB2Q9BYZ6 727 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ABCC13Q9NSE7 274 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 NOP53Q9NZM5 478 aaKnown RBP19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 SQORQ9Y6N5 450 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 FAM237BA0A1B0GVD1 139 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ARHGAP42A6NI28 874 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 ERVK-10P10266 1014 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 TYK2P29597 1187 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 LPIN1Q14693 890 aa19.6■□□□□ 0.73
PRKCSH-209ENST00000589838 KCNA10Q16322 511 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms