RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 SMARCD2Q92925 531 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 RSPRY1Q96DX4 576 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 LRRC3BQ96PB8 259 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 DNPEPQ9ULA0 475 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 ZNF510Q9Y2H8 683 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 ZFP37Q9Y6Q3 630 aaPredicted RBP25.46■■□□□ 1.67
RFX1-205ENST00000589239 FOSL2P15408 326 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 MTHFRP42898 656 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 MRPS25P82663 173 aaKnown RBP25.46■■□□□ 1.67
RFX1-205ENST00000589239 USP4Q13107 963 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 SKIV2LQ15477 1246 aaKnown RBP25.46■■□□□ 1.67
RFX1-205ENST00000589239 CCNG2Q16589 344 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 TTC27Q6P3X3 843 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 NLRP14Q86W24 1093 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 TP53INP2Q8IXH6 220 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 CELF5Q8N6W0 485 aaKnown RBP25.46■■□□□ 1.67
RFX1-205ENST00000589239 TTC13Q8NBP0 860 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 MYADMQ96S97 322 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 DDX50Q9BQ39 737 aaKnown RBP25.46■■□□□ 1.67
RFX1-205ENST00000589239 DTLQ9NZJ0 730 aa25.46■■□□□ 1.67
RFX1-205ENST00000589239 WEE1P30291 646 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 KCNJ1P48048 391 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 PAFAH1B3Q15102 231 aaKnown RBP25.45■■□□□ 1.66
RFX1-205ENST00000589239 RTL3Q8N8U3 475 aaKnown RBP25.45■■□□□ 1.66
RFX1-205ENST00000589239 C12orf50Q8NA57 414 aaPredicted RBP25.45■■□□□ 1.66
RFX1-205ENST00000589239 LRRC19Q9H756 370 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 PRDM16Q9HAZ2 1276 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 CD207Q9UJ71 328 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 RHOQP17081 205 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 NOMO1Q15155 1222 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 C5orf22Q49AR2 442 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 FAM217AQ8IXS0 508 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 LRRN4Q8WUT4 740 aa25.45■■□□□ 1.66
RFX1-205ENST00000589239 USP15Q9Y4E8 981 aaPredicted RBP25.45■■□□□ 1.66
RFX1-205ENST00000589239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.44■■□□□ 1.66
RFX1-205ENST00000589239 LIASO43766 372 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 TCF3P15923 654 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 KCNA5P22460 613 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 RABGAP1LQ5R372 815 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 CCDC137Q6PK04 289 aaKnown RBP25.44■■□□□ 1.66
RFX1-205ENST00000589239 B4GALNT4Q76KP1 1039 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 ZC3H18Q86VM9 953 aaKnown RBP25.44■■□□□ 1.66
RFX1-205ENST00000589239 P2RY11Q96G91 374 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 CELF6Q96J87 481 aaKnown RBP25.44■■□□□ 1.66
RFX1-205ENST00000589239 FUT8Q9BYC5 575 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 KIF9Q9HAQ2 790 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 HOMER3Q9NSC5 361 aa25.44■■□□□ 1.66
RFX1-205ENST00000589239 GBP2P32456 591 aaPredicted RBP25.43■■□□□ 1.66
RFX1-205ENST00000589239 NR2C2P49116 596 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 SLC35B2Q8TB61 432 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 BHMTQ93088 406 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 KLC2Q9H0B6 622 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 TMEM248Q9NWD8 314 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 ZNF212Q9UDV6 495 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 AMACRQ9UHK6 382 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 NUP210Q8TEM1 1887 aaPredicted RBP25.43■■□□□ 1.66
RFX1-205ENST00000589239 GFRA2O00451 464 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 CHRNA3P32297 505 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 CHKAP35790 457 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 COILP38432 576 aaPredicted RBP25.43■■□□□ 1.66
RFX1-205ENST00000589239 EIF3EP60228 445 aaKnown RBP25.43■■□□□ 1.66
RFX1-205ENST00000589239 BYSLQ13895 437 aaKnown RBP25.43■■□□□ 1.66
RFX1-205ENST00000589239 LINC00597Q9H2U6 94 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 UBE2ZQ9H832 354 aaPredicted RBP25.43■■□□□ 1.66
RFX1-205ENST00000589239 C10orf88Q9H8K7 445 aa25.43■■□□□ 1.66
RFX1-205ENST00000589239 WASH4PA8MWX3 477 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 MCF2LO15068 1137 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 SERPINB6P35237 376 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 TPGS1Q6ZTW0 290 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 CPXM2Q8N436 756 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 MMGT1Q8N4V1 131 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 TDRD5Q8NAT2 981 aaKnown RBP25.42■■□□□ 1.66
RFX1-205ENST00000589239 SUSD6Q92537 303 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 WNT6Q9Y6F9 365 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 DOCK8Q8NF50 2099 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 DOCK4Q8N1I0 1966 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 MYO1CO00159 1063 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 RBP3P10745 1247 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 FCARP24071 287 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 TMA16Q96EY4 203 aaKnown RBP25.42■■□□□ 1.66
RFX1-205ENST00000589239 NECTIN4Q96NY8 510 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 OLFM3Q96PB7 478 aa25.42■■□□□ 1.66
RFX1-205ENST00000589239 SP100P23497 879 aaPredicted RBP25.41■■□□□ 1.66
RFX1-205ENST00000589239 FNTAP49354 379 aa25.41■■□□□ 1.66
RFX1-205ENST00000589239 OASLQ15646 514 aaKnown RBP25.41■■□□□ 1.66
RFX1-205ENST00000589239 TANGO2Q6ICL3 276 aa25.41■■□□□ 1.66
RFX1-205ENST00000589239 CCDC105Q8IYK2 499 aa25.41■■□□□ 1.66
RFX1-205ENST00000589239 LRRC1Q9BTT6 524 aa25.41■■□□□ 1.66
RFX1-205ENST00000589239 PARD6BQ9BYG5 372 aa25.41■■□□□ 1.66
RFX1-205ENST00000589239 FRMD8P1Q9BZ68 369 aaPredicted RBP25.41■■□□□ 1.66
RFX1-205ENST00000589239 TRPV4Q9HBA0 871 aa25.41■■□□□ 1.66
RFX1-205ENST00000589239 HEPACAM2A8MVW5 462 aa25.4■■□□□ 1.66
RFX1-205ENST00000589239 TBL1XO60907 577 aa25.4■■□□□ 1.66
RFX1-205ENST00000589239 LAMP2P13473 410 aa25.4■■□□□ 1.66
RFX1-205ENST00000589239 OR1E1P30953 314 aa25.4■■□□□ 1.66
RFX1-205ENST00000589239 DRICH1Q6PGQ1 229 aaPredicted RBP25.4■■□□□ 1.66
RFX1-205ENST00000589239 NKD2Q969F2 451 aaPredicted RBP25.4■■□□□ 1.66
RFX1-205ENST00000589239 CCDC114Q96M63 670 aa25.4■■□□□ 1.66
RFX1-205ENST00000589239 ADAM21Q9UKJ8 722 aa25.4■■□□□ 1.66
RFX1-205ENST00000589239 ZNF148Q9UQR1 794 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms