RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 COMMD8Q9NX08 183 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 TBK1Q9UHD2 729 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SLC12A6Q9UHW9 1150 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 CDY1Q9Y6F8 540 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 HELZP42694 1942 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 MTCL1Q9Y4B5 1905 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 TMEM265A0A087WTH1 108 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 SLC38A8A6NNN8 435 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 FOXO6A8MYZ6 492 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 C2CD2LO14523 706 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 NCAM2O15394 837 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 FGF10O15520 208 aaPredicted RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 ADAM12O43184 909 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 AVILO75366 819 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 CPP00450 1065 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 PTPN3P26045 913 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 PSMB4P28070 264 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 GCAP28676 217 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 HTR7P34969 479 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 MMP13P45452 471 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 TBX4P57082 545 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 DEFB103AP81534 67 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 SARNPP82979 210 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 COG7P83436 770 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 PPIDQ08752 370 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 WASHC5Q12768 1159 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 EFEMP1Q12805 493 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 TAF10Q12962 218 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 DUSP4Q13115 394 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 EIF4EBP2Q13542 120 aaPredicted RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 KLHL38Q2WGJ6 581 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 USP41Q3LFD5 358 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 C10orf120Q5SQS8 335 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 FAM109BQ6ICB4 259 aaPredicted RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 KIAA1841Q6NSI8 718 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 C3orf62Q6ZUJ4 267 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 EXOC3L1Q86VI1 746 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 CAND1Q86VP6 1230 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 IGDCC3Q8IVU1 814 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 CYP4X1Q8N118 509 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 ZNF567Q8N184 647 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 ANKLE1Q8NAG6 615 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 COLGALT1Q8NBJ5 622 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 MDM1Q8TC05 714 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 FBF1Q8TES7 1133 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 GIPC2Q8TF65 315 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 DEPDC1BQ8WUY9 529 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 VWCEQ96DN2 955 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 MRRFQ96E11 262 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 IGSF21Q96ID5 467 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 PAWRQ96IZ0 340 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 CELF6Q96J87 481 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 FCRL2Q96LA5 508 aaPredicted RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 ZNF558Q96NG5 402 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 VN1R3Q9BXE9 311 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 BRD8Q9H0E9 1235 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 CATSPERBQ9H7T0 1116 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 PPCSQ9HAB8 311 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 XAB2Q9HCS7 855 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 TLR8Q9NR97 1041 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 OLA1Q9NTK5 396 aaKnown RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 TMEM51Q9NW97 253 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 IL37Q9NZH6 218 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 KLHL8Q9P2G9 620 aaPredicted RBP9□□□□□ -0.97
SMAD4-206ENST00000588860 MTRRQ9UBK8 725 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 SLC24A2Q9UI40 661 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 NEU3Q9UQ49 428 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 TLR6Q9Y2C9 796 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 TEX264Q9Y6I9 313 aa9□□□□□ -0.97
SMAD4-206ENST00000588860 ANKRD36A6QL64 1941 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 ABHD14A-ACY1A0A1B0GW23 586 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 WDR27A2RRH5 827 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 KCNU1A8MYU2 1149 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 E9PAM4 449 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 KCNK1O00180 336 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 DFFAO00273 331 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 MTSS1O43312 755 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 SPAG6O75602 509 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 TIMP1P01033 207 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 APOEP02649 317 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 HMBSP08397 361 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 SLC2A3P11169 496 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 CHN1P15882 459 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 HOXC13P31276 330 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 OR1D2P34982 312 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 GARSP41250 739 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 TUBP50607 506 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 GEMIN4P57678 1058 aaKnown RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 NR1H3Q13133 447 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 PARP6Q2NL67 630 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 RASIP1Q5U651 963 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 MANEALQ5VSG8 457 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 ZNF534Q76KX8 674 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 TMCO2Q7Z6W1 182 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-206ENST00000588860 C14orf80Q86SX3 495 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 TADA2BQ86TJ2 420 aa8.99□□□□□ -0.97
SMAD4-206ENST00000588860 TDRPQ86YL5 185 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms