RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MOSPD3O75425 235 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 ERLIN1O75477 346 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 LATS1O95835 1130 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 MX2P20592 715 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 TNFRSF8P28908 595 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 ADCY8P40145 1251 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 PRSS36Q5K4E3 855 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 ARTNQ5T4W7 220 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 ADGRF1Q5T601 910 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 B4GALNT4Q76KP1 1039 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 CCDC33Q8N5R6 958 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 NPWQ8N729 165 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 FAM71DQ8N9W8 422 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 TTC16Q8NEE8 873 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 ATXN2LQ8WWM7 1075 aaKnown RBP22.89■■□□□ 1.26
ATG4D-209ENST00000588857 IGSF8Q969P0 613 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 QKIQ96PU8 341 aaKnown RBP eCLIP22.89■■□□□ 1.26
ATG4D-209ENST00000588857 FERMT1Q9BQL6 677 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 ZMYM5Q9UJ78 669 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 SNX24Q9Y343 169 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 MRPS23Q9Y3D9 190 aaKnown RBP22.89■■□□□ 1.26
ATG4D-209ENST00000588857 NEU2Q9Y3R4 380 aa22.89■■□□□ 1.26
ATG4D-209ENST00000588857 CCDC151A5D8V7 595 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 DRGXA6NNA5 263 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 WASH4PA8MWX3 477 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 BHMG1C9JSJ3 638 aaPredicted RBP22.89■■□□□ 1.25
ATG4D-209ENST00000588857 DRG2P55039 364 aaKnown RBP22.89■■□□□ 1.25
ATG4D-209ENST00000588857 FAM133BQ5BKY9 247 aaKnown RBP22.89■■□□□ 1.25
ATG4D-209ENST00000588857 TCEAL5Q5H9L2 206 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 RABGAP1LQ5R372 815 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 RFWD3Q6PCD5 774 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 DDX42Q86XP3 938 aaKnown RBP eCLIP22.89■■□□□ 1.25
ATG4D-209ENST00000588857 CMTM8Q8IZV2 173 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 CCNYQ8ND76 341 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 ADAMTS19Q8TE59 1207 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 ANKRD7Q92527 254 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 WBP2Q969T9 261 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 CFAP97Q9P2B7 532 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 ARHGAP26Q9UNA1 814 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 SH3BP1Q9Y3L3 701 aa22.89■■□□□ 1.25
ATG4D-209ENST00000588857 KCNN4O15554 427 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 PAPLNO95428 1278 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 RBL1P28749 1068 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 SLC6A4P31645 630 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 CARSP49589 748 aaKnown RBP22.88■■□□□ 1.25
ATG4D-209ENST00000588857 VPS41P49754 854 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 HYAL1Q12794 435 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 HLTFQ14527 1009 aaKnown RBP eCLIP22.88■■□□□ 1.25
ATG4D-209ENST00000588857 TRADDQ15628 312 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 HEATR6Q6AI08 1181 aaKnown RBP22.88■■□□□ 1.25
ATG4D-209ENST00000588857 EFHBQ8N7U6 833 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 NETO2Q8NC67 525 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 BRD8Q9H0E9 1235 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 PCDH9Q9HC56 1237 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 TMEM248Q9NWD8 314 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 ZNF510Q9Y2H8 683 aa22.88■■□□□ 1.25
ATG4D-209ENST00000588857 ZNF189O75820 626 aaPredicted RBP22.87■■□□□ 1.25
ATG4D-209ENST00000588857 H2AFXP16104 143 aaPredicted RBP22.87■■□□□ 1.25
ATG4D-209ENST00000588857 ACTN2P35609 894 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 RPL21P46778 160 aaKnown RBP22.87■■□□□ 1.25
ATG4D-209ENST00000588857 GDF10P55107 478 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 ZXDBP98169 803 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 AP1B1Q10567 949 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 C5orf22Q49AR2 442 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 MAP9Q49MG5 647 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 ALFQ53S48 1182 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 RARS2Q5T160 578 aaKnown RBP22.87■■□□□ 1.25
ATG4D-209ENST00000588857 TMEM184AQ6ZMB5 413 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 TFAP2DQ7Z6R9 452 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 NLRP14Q86W24 1093 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 EIF1ADQ8N9N8 165 aaKnown RBP22.87■■□□□ 1.25
ATG4D-209ENST00000588857 CELF6Q96J87 481 aaKnown RBP22.87■■□□□ 1.25
ATG4D-209ENST00000588857 LGMNQ99538 433 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 USP29Q9HBJ7 922 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 STOML2Q9UJZ1 356 aa22.87■■□□□ 1.25
ATG4D-209ENST00000588857 LEFTY2O00292 366 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 CNTN5O94779 1100 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 ZSCAN5DPP0CG00 497 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 ETS1P14921 441 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 IRAK1P51617 712 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 GALNT2Q10471 571 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 CALCOCO2Q13137 446 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 FBXO38Q6PIJ6 1188 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 PRUNE1Q86TP1 453 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 GLIS1Q8NBF1 620 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 LRRN4Q8WUT4 740 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 HLA-CQ95604 372 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 SNF8Q96H20 258 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 KLC2Q9H0B6 622 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 SMG9Q9H0W8 520 aaKnown RBP22.86■■□□□ 1.25
ATG4D-209ENST00000588857 RETREG1Q9H6L5 497 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 NFU1Q9UMS0 254 aa22.86■■□□□ 1.25
ATG4D-209ENST00000588857 DFFAO00273 331 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 STK10O94804 968 aaKnown RBP22.85■■□□□ 1.25
ATG4D-209ENST00000588857 GPS1Q13098 491 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 PRKD1Q15139 912 aaPredicted RBP22.85■■□□□ 1.25
ATG4D-209ENST00000588857 Q6ZNB5 142 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 HTR3DQ70Z44 454 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 TP53INP2Q8IXH6 220 aa22.85■■□□□ 1.25
ATG4D-209ENST00000588857 CFAP52Q8N1V2 620 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms