RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ACADSBP45954 432 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 GCNT1Q02742 428 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 BECN1Q14457 450 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 HNRNPA1L2Q32P51 320 aaKnown RBP14.18□□□□□ -0.14
HDAC5-208ENST00000588419 INAVAQ3KP66 663 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 ZC3H12AQ5D1E8 599 aaKnown RBP14.18□□□□□ -0.14
HDAC5-208ENST00000588419 PRAMEF14Q5SWL7 426 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 LRSAM1Q6UWE0 723 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 GATAD2AQ86YP4 633 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 APCDD1Q8J025 514 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 STK40Q8N2I9 435 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 RNF34Q969K3 372 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 TTC17Q96AE7 1141 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 MRGPRX3Q96LB0 322 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 NEUROG2Q9H2A3 272 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 UBE2TQ9NPD8 197 aaPredicted RBP14.18□□□□□ -0.14
HDAC5-208ENST00000588419 ACP6Q9NPH0 428 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 TOR4AQ9NXH8 423 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 KIAA1522Q9P206 1035 aaPredicted RBP14.18□□□□□ -0.14
HDAC5-208ENST00000588419 FTSJ1Q9UET6 329 aa14.18□□□□□ -0.14
HDAC5-208ENST00000588419 PKD1L2Q7Z442 2459 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 EDDM13A0A1B0GTR0 161 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 LRRC72A6NJI9 287 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 PPP1R3GB7ZBB8 358 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 MED7O43513 233 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 TRUB2O95900 331 aaKnown RBP14.17□□□□□ -0.14
HDAC5-208ENST00000588419 IL1BP01584 269 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 PDGFRAP16234 1089 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 SLC8A1P32418 973 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 CTSKP43235 329 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 GPD2P43304 727 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 GALCP54803 685 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 PITX1P78337 314 aaPredicted RBP14.17□□□□□ -0.14
HDAC5-208ENST00000588419 ECT2LQ008S8 904 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 SFSWAPQ12872 951 aaKnown RBP14.17□□□□□ -0.14
HDAC5-208ENST00000588419 PAK1Q13153 545 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 NNTQ13423 1086 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 ARHGAP44Q17R89 818 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 C9orf64Q5T6V5 341 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 GJB7Q6PEY0 223 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 USP30Q70CQ3 517 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 PASD1Q8IV76 773 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 TRIM59Q8IWR1 403 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 ATP6V0D2Q8N8Y2 350 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 OR14C36Q8NHC7 312 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 AZIN2Q96A70 460 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 SLC39A13Q96H72 371 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 LMLNQ96KR4 655 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 CRACR2AQ9BSW2 395 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 TRIM62Q9BVG3 475 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 SRRTQ9BXP5 876 aaKnown RBP14.17□□□□□ -0.14
HDAC5-208ENST00000588419 IRX2Q9BZI1 471 aaPredicted RBP14.17□□□□□ -0.14
HDAC5-208ENST00000588419 POPDC2Q9HBU9 364 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 CYTH4Q9UIA0 394 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 SCML1Q9UN30 329 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 RAXQ9Y2V3 346 aa14.17□□□□□ -0.14
HDAC5-208ENST00000588419 COL5A1P20908 1838 aaPredicted RBP14.17□□□□□ -0.14
HDAC5-208ENST00000588419 A0A1W2PPC4 97 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 CBX4O00257 560 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 PLK4O00444 970 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 PMM2O15305 246 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 PAPSS1O43252 624 aaPredicted RBP14.16□□□□□ -0.14
HDAC5-208ENST00000588419 TNFSF14O43557 240 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 BNIP3LO60238 219 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 GRAP2O75791 330 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 GNA14O95837 355 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 SRPRAP08240 638 aaKnown RBP14.16□□□□□ -0.14
HDAC5-208ENST00000588419 VAV1P15498 845 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 ABCB4P21439 1286 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 BMP6P22004 513 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 GGCXP38435 758 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 NNMTP40261 264 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 RACK1P63244 317 aaKnown RBP14.16□□□□□ -0.14
HDAC5-208ENST00000588419 COL28A1Q2UY09 1125 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 POM121L1PQ3SYA9 428 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 DHRS13Q6UX07 377 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 SND1Q7KZF4 910 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC5-208ENST00000588419 TMPRSS7Q7RTY8 843 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 OR2T34Q8NGX1 318 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 HNRNPLLQ8WVV9 542 aaKnown RBP14.16□□□□□ -0.14
HDAC5-208ENST00000588419 SKA1Q96BD8 255 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 ORAI3Q9BRQ5 295 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 OSGEPQ9NPF4 335 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 SLCO3A1Q9UIG8 710 aa14.16□□□□□ -0.14
HDAC5-208ENST00000588419 FAM170AA1A519 330 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 ADH1BP00325 375 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 WNT1P04628 370 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 ITGAVP06756 1048 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 MZF1P28698 734 aaPredicted RBP14.15□□□□□ -0.14
HDAC5-208ENST00000588419 ADPRHP54922 357 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 CLDN6P56747 220 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 CENPCQ03188 943 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 PDCLQ13371 301 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 MORC3Q14149 939 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 TAF5Q15542 800 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 ACCSLQ4AC99 568 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 GALNT15Q8N3T1 639 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 AADATQ8N5Z0 425 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 SERAC1Q96JX3 654 aa14.15□□□□□ -0.14
HDAC5-208ENST00000588419 BTN2A3PQ96KV6 586 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms