RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 DEC1Q9P2X7 70 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 MTF2Q9Y483 593 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 PCDHA3Q9Y5H8 950 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 LRRD1A4D1F6 860 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 WASH4PA8MWX3 477 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 H3BRJ5 948 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 DDX3YO15523 660 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 PDGFBP01127 241 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 EGFP01133 1207 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 KRT1P04264 644 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 RHOQP17081 205 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ERCC2P18074 760 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 AMPD1P23109 780 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 MZF1P28698 734 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ARL4AP40617 200 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 EIF2DP41214 584 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 HCAR3P49019 387 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 DGKGP49619 791 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 PEX5P50542 639 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 AMPD2Q01433 879 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF177Q13360 481 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 CDH18Q13634 790 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 DPYSQ14117 519 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 PDK2Q15119 407 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 LLGL1Q15334 1064 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 GEN1Q17RS7 908 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 TMEM196Q5HYL7 178 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 TMEM215Q68D42 235 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 GRAMD4Q6IC98 578 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 MFSD7Q6UXD7 560 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 KIAA0907Q7Z7F0 614 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF687Q8N1G0 1237 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 NETO2Q8NC67 525 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ALG3Q92685 438 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 RNF25Q96BH1 459 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 MSANTD3Q96H12 275 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 HES6Q96HZ4 224 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 CSPG4P5Q96PW8 444 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 CALN1Q9BXU9 219 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 SLC2A11Q9BYW1 496 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 FOXQ1Q9C009 403 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ARHGEF4Q9NR80 690 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ABCB8Q9NUT2 735 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 ETNK2Q9NVF9 386 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 TMEM248Q9NWD8 314 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 DDX56Q9NY93 547 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 DNAI1Q9UI46 699 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 INTS6Q9UL03 887 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 NDRG2Q9UN36 371 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 TBC1D30Q9Y2I9 924 aa11.01□□□□□ -0.65
SMARCA4-213ENST00000587988 F5P12259 2224 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 A0A0A0MRY4 1105 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 A0A0D9SEW6 157 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 KANSL1LA0AUZ9 987 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 CCDC66A2RUB6 948 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 PRRT4C9JH25 899 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 K7EQS6 105 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 MAN2B1O00754 1011 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 DCLK1O15075 740 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 DAPK3O43293 454 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 KAT7O95251 611 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 PABPC1P11940 636 aaKnown RBP11□□□□□ -0.65
SMARCA4-213ENST00000587988 TARSP26639 723 aaKnown RBP11□□□□□ -0.65
SMARCA4-213ENST00000587988 OR1E1P30953 314 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 HTR7P34969 479 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 CSKP41240 450 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 DNA2P51530 1060 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF135P52742 658 aaPredicted RBP11□□□□□ -0.65
SMARCA4-213ENST00000587988 FZD5Q13467 585 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 HS1BP3Q53T59 392 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 ANKRD20A8PQ5CZ79 823 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF569Q5MCW4 686 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 MEI1Q5TIA1 1274 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 DCAF12L1Q5VU92 463 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 AADACL2Q6P093 401 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF852Q6ZMS4 543 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 KATNAL2Q8IYT4 538 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 APCDD1Q8J025 514 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 SLC35F6Q8N357 371 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 DDX51Q8N8A6 666 aaKnown RBP eCLIP11□□□□□ -0.65
SMARCA4-213ENST00000587988 RTL3Q8N8U3 475 aaKnown RBP11□□□□□ -0.65
SMARCA4-213ENST00000587988 TERB1Q8NA31 727 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 TRIM58Q8NG06 486 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 PCDH19Q8TAB3 1148 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 FAF2Q96CS3 445 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 ALG14Q96F25 216 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 SHDQ96IW2 340 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 ALS2CR12Q96Q35 445 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 KLC2Q9H0B6 622 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 EPHX3Q9H6B9 360 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 NOL6Q9H6R4 1146 aaKnown RBP11□□□□□ -0.65
SMARCA4-213ENST00000587988 CATSPERBQ9H7T0 1116 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 TBC1D17Q9HA65 648 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 LTB4R2Q9NPC1 389 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 KCND1Q9NSA2 647 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 KIAA1522Q9P206 1035 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms