RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 USP29Q9HBJ7 922 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 RXFP1Q9HBX9 757 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 ZNF334Q9HCZ1 680 aaPredicted RBP10.48□□□□□ -0.73
APOC1-201ENST00000586638 ENTPD7Q9NQZ7 604 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 TLR9Q9NR96 1032 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 FNIP2Q9P278 1114 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 OR12D3Q9UGF7 316 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 TLR6Q9Y2C9 796 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 HS3ST4Q9Y661 456 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 NUP205Q92621 2012 aa10.48□□□□□ -0.73
APOC1-201ENST00000586638 BCLAF3A2AJT9 711 aaKnown RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 KCNU1A8MYU2 1149 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 F5H423 210 aaPredicted RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 TLR5O60602 858 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 TMEM63AO94886 807 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 SRGAP2BP0DMP2 458 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 OAS2P29728 719 aaKnown RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 HOXC13P31276 330 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 NR2C2P49116 596 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 IRAK1P51617 712 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 PMS2P54278 862 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 BASP1P80723 227 aaKnown RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 GAD2Q05329 585 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 XRCC4Q13426 336 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 PRKD1Q15139 912 aaPredicted RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 TAF12Q16514 161 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 ARTNQ5T4W7 220 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 RWDD4Q6NW29 188 aaKnown RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 TMC7Q7Z402 723 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 TCEAL8Q8IYN2 117 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 KRT222Q8N1A0 295 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 PDZD8Q8NEN9 1154 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 OR2W6PQ8NHA6 318 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 CCDC110Q8TBZ0 833 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 TFB1MQ8WVM0 346 aaKnown RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 OVCA2Q8WZ82 227 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 CPT1BQ92523 772 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 SUSD6Q92537 303 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 PRCCQ92733 491 aaPredicted RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 RTP4Q96DX8 246 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 ASIC4Q96FT7 647 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 CELF6Q96J87 481 aaKnown RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 CEP295NLQ96MC4 621 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 KLHL5Q96PQ7 755 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 HAPLN3Q96S86 360 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 RUFY1Q96T51 708 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 LGMNQ99538 433 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 TCF25Q9BQ70 676 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 ADAM7Q9H2U9 754 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 EPB41L4BQ9H329 900 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 PRDM16Q9HAZ2 1276 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 SEPT10Q9P0V9 454 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 HSFX1Q9UBD0 423 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 TPX2Q9ULW0 747 aaKnown RBP10.47□□□□□ -0.73
APOC1-201ENST00000586638 PLAAQ9Y263 795 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 MYO7AQ13402 2215 aa10.47□□□□□ -0.73
APOC1-201ENST00000586638 MYO18AQ92614 2054 aaKnown RBP10.46□□□□□ -0.73
APOC1-201ENST00000586638 CACNA1BQ00975 2339 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 TCRBV7S3A2A0A539 114 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 HACD1B0YJ81 288 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 E9PAM4 449 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 AGPSO00116 658 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 PPP1R12AO14974 1030 aaPredicted RBP10.46□□□□□ -0.73
APOC1-201ENST00000586638 COCHO43405 550 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 TGM5O43548 720 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 GFRA3O60609 400 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 CXCL14O95715 111 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 IGLV3-27P01718 113 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 IRF1P10914 325 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 HCAR3P49019 387 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 ZNF135P52742 658 aaPredicted RBP10.46□□□□□ -0.73
APOC1-201ENST00000586638 CAV1Q03135 178 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 AP1B1Q10567 949 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 MS4A13Q5J8X5 152 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 RAP1GAP2Q684P5 730 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 HEATR6Q6AI08 1181 aaKnown RBP10.46□□□□□ -0.73
APOC1-201ENST00000586638 ANKRD54Q6NXT1 300 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 TMEM184AQ6ZMB5 413 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 CHSY1Q86X52 802 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 GPR65Q8IYL9 337 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 ATP6V0D2Q8N8Y2 350 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 VN1R2Q8NFZ6 395 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 RIPOR3Q96MK2 946 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 CEP41Q9BYV8 373 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 NACA2Q9H009 215 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 S1PR5Q9H228 398 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 CDC42EP4Q9H3Q1 356 aaKnown RBP10.46□□□□□ -0.73
APOC1-201ENST00000586638 FAM86C1Q9NVL1 165 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 OGFRQ9NZT2 677 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 PAK5Q9P286 719 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 STK39Q9UEW8 545 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 SHOC2Q9UQ13 582 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 SSX2IPQ9Y2D8 614 aa10.46□□□□□ -0.73
APOC1-201ENST00000586638 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
APOC1-201ENST00000586638 CACNA1GO43497 2377 aa10.46□□□□□ -0.74
APOC1-201ENST00000586638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.45□□□□□ -0.74
APOC1-201ENST00000586638 C2orf78A6NCI8 922 aa10.45□□□□□ -0.74
APOC1-201ENST00000586638 ZNF840PA6NDX5 716 aa10.45□□□□□ -0.74
APOC1-201ENST00000586638 GOLGA8MH3BSY2 632 aa10.45□□□□□ -0.74
APOC1-201ENST00000586638 FGF10O15520 208 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms