RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SUSD4Q5VX71 490 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 TATDN1Q6P1N9 297 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 LRSAM1Q6UWE0 723 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 PI4KAP1Q8N8J0 262 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 WDR60Q8WVS4 1066 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF622Q969S3 477 aaKnown RBP eCLIP2.08□□□□□ -2.082e-6■■□□□ 13.1
SMCHD1-211ENST00000584897 CRNKL1Q9BZJ0 848 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 JMJD4Q9H9V9 463 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 AKIP1Q9NQ31 210 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 TM7SF3Q9NS93 570 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 ISY1Q9ULR0 285 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 DOCK2Q92608 1830 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 GAKO14976 1311 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 ADAMTS20P59510 1910 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 RLFQ13129 1914 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 ROBO3Q96MS0 1386 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 ACKR2O00590 384 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 GRM6O15303 877 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 NCAM2O15394 837 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 UNC5CO95185 931 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 NDUFA10O95299 355 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 AHSGP02765 367 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 FOSL2P15408 326 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 FGFR2P21802 821 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 RRM1P23921 792 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 GSTM5P46439 218 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 BCAT1P54687 386 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 POU6F2P78424 691 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 PRKG2Q13237 762 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 MYBPC3Q14896 1274 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 CERKLQ49MI3 558 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 PHF19Q5T6S3 580 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 CLNKQ7Z7G1 428 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 NKAPQ8N5F7 415 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM57Q8N5G2 664 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 FAM151AQ8WW52 585 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 LPAR1Q92633 364 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 VOPP1Q96AW1 172 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 TRAPPC9Q96Q05 1148 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 LBHD1Q9BQE6 289 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 MAK16Q9BXY0 300 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC29A3Q9BZD2 475 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 TTYH3Q9C0H2 523 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 MAGEH1Q9H213 219 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 TTYH1Q9H313 450 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 SMARCAD1Q9H4L7 1026 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 EPHX3Q9H6B9 360 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 GRPEL1Q9HAV7 217 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 ALKBH4Q9NXW9 302 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 CALCOCO1Q9P1Z2 691 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 GRHPRQ9UBQ7 328 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 FBXO40Q9UH90 709 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 SH3BP1Q9Y3L3 701 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 WNT6Q9Y6F9 365 aa2.08□□□□□ -2.08
SMCHD1-211ENST00000584897 A0A088AWK7 358 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 EFCAB8A8MWE9 144 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 OPHN1O60890 802 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM127O75204 238 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TBCAO75347 108 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 GFPT2O94808 682 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MPIG6BO95866 241 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MT-ND5P03915 603 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM191BP0C7N4 346 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 NDUFB7P17568 137 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PRKCHP24723 683 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PPARGP37231 505 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MCM2P49736 904 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CASP5P51878 434 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PLIN5Q00G26 463 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PPATQ06203 517 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 GPR68Q15743 365 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SMAD1Q15797 465 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC9C1Q4G0N8 1177 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC9A4Q6AI14 798 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 RINT1Q6NUQ1 792 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 UNQ6494/PRO21346Q6UXR6 183 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CYP26C1Q6V0L0 522 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 DSTYKQ6XUX3 929 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 KANSL1Q7Z3B3 1105 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 FAM160B2Q86V87 743 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 KRT73Q86Y46 540 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 RASGRP3Q8IV61 690 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ABRAQ8N0Z2 381 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D16Q8TBP0 767 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 MDM1Q8TC05 714 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TSPEARQ8WU66 669 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 CASKIN2Q8WXE0 1202 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D5Q92609 795 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ALOXE3Q9BYJ1 711 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 KRTAP3-1Q9BYR8 98 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 IMPG2Q9BZV3 1241 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF518BQ9C0D4 1074 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 UNKLQ9H9P5 680 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 BCO1Q9HAY6 547 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D22BQ9NU19 505 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 STK39Q9UEW8 545 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 ACTL7AQ9Y615 435 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PLXNB2O15031 1838 aa2.07□□□□□ -2.08
SMCHD1-211ENST00000584897 PLIN4Q96Q06 1357 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms