RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 MPPE1Q53F39 396 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 FAM133BQ5BKY9 247 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 MPP7Q5T2T1 576 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 GRAMD4Q6IC98 578 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 NUDT18Q6ZVK8 323 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 GPR161Q8N6U8 529 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 ATP6V0D2Q8N8Y2 350 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 TRIM58Q8NG06 486 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 BTN2A3PQ96KV6 586 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 SLC2A11Q9BYW1 496 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 SLC12A6Q9UHW9 1150 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 FBXO10Q9UK96 956 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 DCHS1Q96JQ0 3298 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 CHURC1-FNTBB4DL54 471 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 K7EQS6 105 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 RNF40O75150 1001 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 PAGE1O75459 146 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 MOCS2O96007 188 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 CNR2P34972 360 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 SSR1P43307 286 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 TNFRSF4P43489 277 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 CXCL12P48061 93 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 AIF1P55008 147 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 FOXK2Q01167 660 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 KDSRQ06136 332 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 MESP2Q0VG99 397 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 SCAPQ12770 1279 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 HADHQ16836 314 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 RNF43Q68DV7 783 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 TXNRD3NBQ6F5E7 133 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 NADSYN1Q6IA69 706 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 NAT16Q8N8M0 369 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 TERB1Q8NA31 727 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 DDI1Q8WTU0 396 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 P2RY11Q96G91 374 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 ALS2CR12Q96Q35 445 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 HAPLN3Q96S86 360 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 SNRNP25Q9BV90 132 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 TMPRSS4Q9NRS4 437 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 XPO7Q9UIA9 1087 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 FZD10Q9ULW2 581 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 SLC27A6Q9Y2P4 619 aa16.49■□□□□ 0.23
CSNK1D-223ENST00000584472 KIF5CO60282 957 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 RARAP10276 462 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 DGKGP49619 791 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 BOLA3Q53S33 107 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 ERMARDQ5T6L9 678 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 PIK3R6Q5UE93 754 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 LRRC38Q5VT99 294 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 POLNQ7Z5Q5 900 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 PSTKQ8IV42 348 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 RHOT1Q8IXI2 618 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 KCNV2Q8TDN2 545 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 BHMTQ93088 406 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 ACDQ96AP0 544 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 TMA16Q96EY4 203 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 ZWILCHQ9H900 591 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 PLK2Q9NYY3 685 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 AMFRQ9UKV5 643 aa16.48■□□□□ 0.23
CSNK1D-223ENST00000584472 DOCK4Q8N1I0 1966 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 GPR179Q6PRD1 2367 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 CCDC163A0A0D9SF12 145 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 TBC1D3BA6NDS4 549 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 PSTPIP1O43586 416 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 FTCDO95954 541 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 KRT7P08729 469 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 CISD3P0C7P0 127 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 CHRM1P11229 460 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 HOXD9P28356 352 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 SLC6A4P31645 630 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 MRPS21P82921 87 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 SMTNL2Q2TAL5 461 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 HSF5Q4G112 596 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 MS4A13Q5J8X5 152 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 EFHC2Q5JST6 749 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 KCNT1Q5JUK3 1230 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 ZNF569Q5MCW4 686 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 ZNF557Q8N988 423 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 USP33Q8TEY7 942 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 C1orf74Q96LT6 269 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 MAGEB5Q9BZ81 275 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 OSBPL2Q9H1P3 480 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 AP4E1Q9UPM8 1137 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 HS3ST4Q9Y661 456 aa16.47■□□□□ 0.23
CSNK1D-223ENST00000584472 CACNA1AO00555 2505 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 GOLGA6L7A0A1B0GV03 622 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 TYW5A2RUC4 315 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 TSPAN3O60637 253 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 TNNT1P13805 278 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 CTNNA2P26232 953 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 GJC1P36383 396 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 CA9Q16790 459 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 ATP13A4Q4VNC1 1196 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 ACBD5Q5T8D3 534 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms