RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NEDD8-MDP1E9PL57 170 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 KCNK3O14649 394 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 PYGMP11217 842 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 SRFP11831 508 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 TYRP14679 529 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 TCP1P17987 556 aaKnown RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 HOXD9P28356 352 aaPredicted RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 CASQ1P31415 396 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 MAPKAPK2P49137 400 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 SGSHP51688 502 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 OXCT1P55809 520 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 RPS24P62847 133 aaKnown RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 PFKPQ01813 784 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 MMRN1Q13201 1228 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 TFDP2Q14188 446 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 ANO4Q32M45 955 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 DCAF12L1Q5VU92 463 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 SETD3Q86TU7 594 aaPredicted RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 NLRP14Q86W24 1093 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 LZTR1Q8N653 840 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 RTL3Q8N8U3 475 aaKnown RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 ST13P5Q8NFI4 369 aaPredicted RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 MYEOVQ96EZ4 313 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 RNF157Q96PX1 679 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 XPO6Q96QU8 1125 aaKnown RBP12□□□□□ -0.49
CDRT1-207ENST00000583965 ARHGEF4Q9NR80 690 aa12□□□□□ -0.49
CDRT1-207ENST00000583965 hCG_1818297A0A087WSY0 165 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.99□□□□□ -0.49
CDRT1-207ENST00000583965 DCLK1O15075 740 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 CACNG3O60359 315 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 CNTN5O94779 1100 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 LUC7L3O95232 432 aaKnown RBP11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ASGR2P07307 311 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 GLULP15104 373 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ERCC2P18074 760 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 AMPD1P23109 780 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 SERPINB6P35237 376 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 EIF2DP41214 584 aaKnown RBP11.99□□□□□ -0.49
CDRT1-207ENST00000583965 DNA2P51530 1060 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 AMPD2Q01433 879 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 TNK2Q07912 1038 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ZNF177Q13360 481 aaPredicted RBP11.99□□□□□ -0.49
CDRT1-207ENST00000583965 SLC12A1Q13621 1099 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 PREPLQ4J6C6 727 aaPredicted RBP11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ALFQ53S48 1182 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 TMCO3Q6UWJ1 677 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ZNF783Q6ZMS7 281 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 CFAP52Q8N1V2 620 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 FIBINQ8TAL6 211 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.99□□□□□ -0.49
CDRT1-207ENST00000583965 MSANTD3Q96H12 275 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 OSBPL9Q96SU4 736 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 OSBPL8Q9BZF1 889 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 SLC2A4RGQ9NR83 387 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 MPP6Q9NZW5 540 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ZNF212Q9UDV6 495 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 FBXO10Q9UK96 956 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 DUSP12Q9UNI6 340 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 SORCS3Q9UPU3 1222 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 TBC1D30Q9Y2I9 924 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 SAR1BQ9Y6B6 198 aa11.99□□□□□ -0.49
CDRT1-207ENST00000583965 ILVBLA1L0T0 632 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 H0Y626 953 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 APOL1O14791 398 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 TJP3O95049 919 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 OR1E1P30953 314 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 ETFBP38117 255 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 IRAK1P51617 712 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 NDST2P52849 883 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 YBEYP58557 167 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-207ENST00000583965 ZNF211Q13398 564 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-207ENST00000583965 CDH18Q13634 790 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 PAFAH1B3Q15102 231 aaKnown RBP11.98□□□□□ -0.49
CDRT1-207ENST00000583965 C6orf118Q5T5N4 469 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 SLC9A4Q6AI14 798 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 C1orf228Q6PIY5 440 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 BBS12Q6ZW61 710 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 TFAP2DQ7Z6R9 452 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 CIR1Q86X95 450 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-207ENST00000583965 RFX6Q8HWS3 928 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 MFN1Q8IWA4 741 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 ETFBKMTQ8IXQ9 262 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 UMODL1-AS1Q8N2C9 162 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 CARNMT1Q8N4J0 409 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 PQLC3Q8N755 202 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 MAIP1Q8WWC4 291 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 ZNF592Q92610 1267 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 BHMTQ93088 406 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 EXOC4Q96A65 974 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 PSMB7Q99436 277 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 NAP1L3Q99457 506 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-207ENST00000583965 C8orf33Q9H7E9 229 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-207ENST00000583965 PLK2Q9NYY3 685 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 GTSE1Q9NYZ3 720 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 TTC7AQ9ULT0 858 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-207ENST00000583965 RAD54BQ9Y620 910 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 ANKRD36A6QL64 1941 aa11.98□□□□□ -0.49
CDRT1-207ENST00000583965 OTOL1A6NHN0 477 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms