RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 NCOR2Q9Y618 2525 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 IGLV3-10A0A075B6K4 115 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 A0A1B0GTH6 734 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 TARSL2A2RTX5 802 aaKnown RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 H0Y626 953 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 TM4SF5O14894 197 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 PAGE1O75459 146 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 CLDN11O75508 207 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 FERP16591 822 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 CD6P30203 668 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 FLT3P36888 993 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 CSKP41240 450 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 PTGER3P43115 390 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 DHPSP49366 369 aaPredicted RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 TPMTP51580 245 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 NRG1Q02297 640 aaPredicted RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 RPL6Q02878 288 aaKnown RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 DEUP1Q05D60 604 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 PTP4A2Q12974 167 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 NME3Q13232 169 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 SF3A2Q15428 464 aaKnown RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 CLEC16AQ2KHT3 1053 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 HNRNPA1L2Q32P51 320 aaKnown RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 PLEKHG6Q3KR16 790 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 FILIP1LQ4L180 1135 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 AASDHQ4L235 1098 aaPredicted RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 FNDC3BQ53EP0 1204 aaKnown RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 PITRM1Q5JRX3 1037 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 LYSMD4Q5XG99 296 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 FBXL22Q6P050 247 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 PHF13Q86YI8 300 aaPredicted RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 TMEFF1Q8IYR6 380 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 ZNF683Q8IZ20 524 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 CCAR2Q8N163 923 aaKnown RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 CFAP52Q8N1V2 620 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 CARNMT1Q8N4J0 409 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 FRMD1Q8N878 549 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 CYB5D2Q8WUJ1 264 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 DNASE2BQ8WZ79 361 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 PRCCQ92733 491 aaPredicted RBP10.21□□□□□ -0.77
SKA2-208ENST00000583927 RNF34Q969K3 372 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 MRGPRX3Q96LB0 322 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 HAPLN3Q96S86 360 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 NUP58Q9BVL2 599 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 EDEM3Q9BZQ6 932 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 TBC1D30Q9Y2I9 924 aa10.21□□□□□ -0.77
SKA2-208ENST00000583927 PLXNA2O75051 1894 aa10.21□□□□□ -0.78
SKA2-208ENST00000583927 CXorf51AA0A1B0GTR3 108 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 LNP1A1A4G5 178 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 C2CD4BA6NLJ0 364 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 DRGXA6NNA5 263 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 I6L893 689 aaPredicted RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 KHNYNO15037 678 aaKnown RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 TEX33O43247 280 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 GDF9O60383 454 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 ADCY5O95622 1261 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 CALB1P05937 261 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 PTPN9P43378 593 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 SULT1E1P49888 294 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 CDH4P55283 916 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 RNASE9P60153 205 aaKnown RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 ST8SIA6P61647 398 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 ECT2LQ008S8 904 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 ZNF33AQ06730 810 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 NR1I3Q14994 352 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 DUOXA1Q1HG43 343 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 FIGNQ5HY92 759 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 ARTNQ5T4W7 220 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 CXorf57Q6NSI4 855 aaKnown RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 TRNP1Q6NT89 227 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 USP30Q70CQ3 517 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 STRADAQ7RTN6 431 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 DGLUCYQ7Z3D6 616 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 IRF2BP2Q7Z5L9 587 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 SLC41A1Q8IVJ1 513 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 C3orf20Q8ND61 904 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 BAP1Q92560 729 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 CENPIQ92674 756 aaPredicted RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 IGSF8Q969P0 613 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 ALG14Q96F25 216 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 VCPIP1Q96JH7 1222 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 PCMTD1Q96MG8 357 aaPredicted RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 RPRD1AQ96P16 312 aaPredicted RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 TBCBQ99426 244 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 SYT11Q9BT88 431 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 TRPM6Q9BX84 2022 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 TKTL2Q9H0I9 626 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 RSPH9Q9H1X1 276 aaPredicted RBP10.2□□□□□ -0.78
SKA2-208ENST00000583927 PRSS16Q9NQE7 514 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 AIPL1Q9NZN9 384 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 CYP8B1Q9UNU6 501 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 ERVW-1Q9UQF0 538 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 OR51B4Q9Y5P0 310 aa10.2□□□□□ -0.78
SKA2-208ENST00000583927 SYNJ2BP-COX16A0A087WUM0 186 aa10.19□□□□□ -0.78
SKA2-208ENST00000583927 EDDM13A0A1B0GTR0 161 aa10.19□□□□□ -0.78
SKA2-208ENST00000583927 TCRBV5S1A1TA0A578 114 aa10.19□□□□□ -0.78
SKA2-208ENST00000583927 SIGLEC16A6NMB1 481 aa10.19□□□□□ -0.78
SKA2-208ENST00000583927 NDUFS2O75306 463 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms