RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ST8SIA6P61647 398 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 DNAJC3Q13217 504 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 TMPRSS12Q86WS5 348 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 APCDD1Q8J025 514 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 FMR1NBQ8N0W7 255 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-218ENST00000583593 OR2T34Q8NGX1 318 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 ADAM32Q8TC27 787 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-218ENST00000583593 FZD4Q9ULV1 537 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 TLR6Q9Y2C9 796 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 PCDHB4Q9Y5E5 795 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 PCDHGA1Q9Y5H4 931 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 MYLKQ15746 1914 aa13.95□□□□□ -0.18
CCDC57-218ENST00000583593 PLK4O00444 970 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 ENC1O14682 589 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 PMM2O15305 246 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 RNASEH1O60930 286 aaKnown RBP13.94□□□□□ -0.18
CCDC57-218ENST00000583593 RNASEH2AO75792 299 aaKnown RBP13.94□□□□□ -0.18
CCDC57-218ENST00000583593 SRPRAP08240 638 aaKnown RBP13.94□□□□□ -0.18
CCDC57-218ENST00000583593 CD38P28907 300 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 GPD2P43304 727 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 SYPL2Q5VXT5 272 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 TAC4Q86UU9 113 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 ENGASEQ8NFI3 743 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 RPL10LQ96L21 214 aaKnown RBP13.94□□□□□ -0.18
CCDC57-218ENST00000583593 SERPINB11Q96P15 392 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 NT5C1BQ96P26 610 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 GSDMAQ96QA5 445 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 TSG101Q99816 390 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 RMND1Q9NWS8 449 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 KNTC1P50748 2209 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 DOCK9Q9BZ29 2069 aa13.94□□□□□ -0.18
CCDC57-218ENST00000583593 EDDM13A0A1B0GTR0 161 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 LRRC72A6NJI9 287 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 E9PAM4 449 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 FBXO21O94952 628 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 MOCS2O96007 188 aaPredicted RBP13.93□□□□□ -0.18
CCDC57-218ENST00000583593 VAV1P15498 845 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 GOT1P17174 413 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 DRD3P35462 400 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 PSMD8P48556 350 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 STK19P49842 368 aaPredicted RBP13.93□□□□□ -0.18
CCDC57-218ENST00000583593 CCR5P51681 352 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 ADPRHP54922 357 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 PPP2CBP62714 309 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 PPP2CAP67775 309 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 ECT2LQ008S8 904 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 LRRC63Q05C16 580 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 SFSWAPQ12872 951 aaKnown RBP13.93□□□□□ -0.18
CCDC57-218ENST00000583593 BNIP3Q12983 259 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 NNTQ13423 1086 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 EIF4EBP2Q13542 120 aaPredicted RBP13.93□□□□□ -0.18
CCDC57-218ENST00000583593 CDH18Q13634 790 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 STILQ15468 1287 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 INAVAQ3KP66 663 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 SND1Q7KZF4 910 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC57-218ENST00000583593 ARHGEF19Q8IW93 802 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 STK40Q8N2I9 435 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 TSC1Q92574 1164 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 CNDP2Q96KP4 475 aaKnown RBP13.93□□□□□ -0.18
CCDC57-218ENST00000583593 OMDQ99983 421 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 DDX50Q9BQ39 737 aaKnown RBP13.93□□□□□ -0.18
CCDC57-218ENST00000583593 AASDHPPTQ9NRN7 309 aa13.93□□□□□ -0.18
CCDC57-218ENST00000583593 ARID1BQ8NFD5 2236 aaPredicted RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 ASXL3Q9C0F0 2248 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 LATO43561 262 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 RFPL3O75679 317 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 LDOC1O95751 146 aaPredicted RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 IGLV3-25P01717 112 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 ITGAVP06756 1048 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 ITPKBP27987 946 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 MZF1P28698 734 aaPredicted RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 EPHA8P29322 1005 aaPredicted RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 ACADVLP49748 655 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 NUMBP49757 651 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 METAP1P53582 386 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 NXPH1P58417 271 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 PITX1P78337 314 aaPredicted RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 ZC3H12AQ5D1E8 599 aaKnown RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 RAP1GAP2Q684P5 730 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 BEND5Q7L4P6 421 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 KANSL1Q7Z3B3 1105 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 LGI2Q8N0V4 545 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 EID2Q8N6I1 236 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 OR14C36Q8NHC7 312 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 FAM131CQ96AQ9 280 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 KREMEN1Q96MU8 473 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 METTL14Q9HCE5 456 aaKnown RBP13.92□□□□□ -0.18
CCDC57-218ENST00000583593 ARHGAP20Q9P2F6 1191 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 CYTH4Q9UIA0 394 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 SHROOM3Q8TF72 1996 aa13.92□□□□□ -0.18
CCDC57-218ENST00000583593 KALRNO60229 2985 aa13.91□□□□□ -0.18
CCDC57-218ENST00000583593 TYW5A2RUC4 315 aaKnown RBP13.91□□□□□ -0.18
CCDC57-218ENST00000583593 TLR4O00206 839 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms