RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772		H7C1Q1	480 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	DLGAP3	O95886	979 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	TSPAN7	P41732	249 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CA7	P43166	264 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CLK2	P49760	499 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	NPEPPS	P55786	919 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	ERV3-1	Q14264	604 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CLPP	Q16740	277 aa	Predicted RBP	5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	DEFB133	Q30KQ1	61 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CES4A	Q5XG92	561 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CPZ	Q66K79	652 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	PAMR1	Q6UXH9	720 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	TECPR1	Q7Z6L1	1165 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	PRPF39	Q86UA1	669 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	LRRTM3	Q86VH5	581 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	TRIM69	Q86WT6	500 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	DCP2	Q8IU60	420 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CCDC83	Q8IWF9	413 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	LRRC17	Q8N6Y2	441 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	ARL10	Q8N8L6	244 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	FAR1	Q8WVX9	515 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	SEC14L1	Q92503	715 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	RMND5B	Q96G75	393 aa	Predicted RBP	5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	PIWIL1	Q96J94	861 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	IL12RB2	Q99665	862 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	ZNF559	Q9BR84	538 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	TTLL2	Q9BWV7	592 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	DCLK3	Q9C098	648 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	NEUROG2	Q9H2A3	272 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CAAP1	Q9H8G2	361 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	PRSS16	Q9NQE7	514 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	XPNPEP1	Q9NQW7	623 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	TRPM5	Q9NZQ8	1165 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	SEC63	Q9UGP8	760 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	CYTH4	Q9UIA0	394 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	APPL1	Q9UKG1	709 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	RNF215	Q9Y6U7	377 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	TRPM6	Q9BX84	2022 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772	PIKFYVE	Q9Y2I7	2098 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	SSU72P8	A0A1W2PR75	194 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	LMO7DN	F2Z398	122 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	TIMM44	O43615	452 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	GREM1	O60565	184 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	CTAG2	O75638	210 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	TMEM63A	O94886	807 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ODC1	P11926	461 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	PNLIP	P16233	465 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	HNRNPH3	P31942	346 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ARL2	P36404	184 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	SMS	P52788	366 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	THOP1	P52888	689 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	PSMC5	P62195	406 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	MYL7	Q01449	175 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	KRTAP1-1	Q07627	177 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	CBLB	Q13191	982 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ECM1	Q16610	540 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	NFE2	Q16621	373 aa	Predicted RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	MIDN	Q504T8	468 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	SETMAR	Q53H47	684 aa	Predicted RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	FBLN7	Q53RD9	439 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	DCAF12	Q5T6F0	453 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ESRP1	Q6NXG1	681 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772		Q6ZS92	163 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	LYSMD3	Q7Z3D4	306 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ANKS1B	Q7Z6G8	1248 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ABI3BP	Q7Z7G0	1075 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	NEK8	Q86SG6	692 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	MEX3D	Q86XN8	651 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ESX1	Q8N693	406 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ARMC2	Q8NEN0	867 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	OR6B3	Q8NGW1	331 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ASAP3	Q8TDY4	903 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	LARP4B	Q92615	738 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	C18orf25	Q96B23	403 aa	Predicted RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	NACC2	Q96BF6	587 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	RTP4	Q96DX8	246 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	DRC1	Q96MC2	740 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	MTR	Q99707	1265 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	ZPBP	Q9BS86	351 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	BDH2	Q9BUT1	245 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	NUDT9	Q9BW91	350 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	UNC45A	Q9H3U1	944 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	LRTM1	Q9HBL6	345 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	SLC24A3	Q9HC58	644 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.2	□□□□□ -1.58	1e-6	■■■■■ 107.6
MSI2-216	ENST00000582772	DNAJB12	Q9NXW2	375 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	STMN3	Q9NZ72	180 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	APEX2	Q9UBZ4	518 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	VPS51	Q9UID3	782 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	G3BP2	Q9UN86	482 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	PCDHB13	Q9Y5F0	798 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	RPS6KL1	Q9Y6S9	549 aa		5.2	□□□□□ -1.58
MSI2-216	ENST00000582772	SCN1A	P35498	2009 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	COL7A1	Q02388	2944 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	LOC100653049	A0A140TA62	436 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772		A0A1W2PP55	124 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772		A0A1W2PQJ5	194 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	CDC14C	A4D256	554 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	DRGX	A6NNA5	263 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms