RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 EFR3BQ9Y2G0 817 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 SAR1BQ9Y6B6 198 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 NCOR1O75376 2440 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 WASH4PA8MWX3 477 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 CES2O00748 559 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 FGF10O15520 208 aaPredicted RBP9.81□□□□□ -0.84
RFFL-210ENST00000582308 DAPK3O43293 454 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 CST8O60676 142 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 NFATC1O95644 943 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 PENKP01210 267 aaPredicted RBP9.81□□□□□ -0.84
RFFL-210ENST00000582308 BMP1P13497 986 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 CETN2P41208 172 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 CDH4P55283 916 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 RUNX3Q13761 415 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 ANO4Q32M45 955 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 MPPE1Q53F39 396 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 MPP7Q5T2T1 576 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 SEL1L2Q5TEA6 688 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 TTC39BQ5VTQ0 682 aaPredicted RBP9.81□□□□□ -0.84
RFFL-210ENST00000582308 SLC9A4Q6AI14 798 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 BBS12Q6ZW61 710 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 CHST9Q7L1S5 443 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 TFAP2DQ7Z6R9 452 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 SLC13A5Q86YT5 568 aaPredicted RBP9.81□□□□□ -0.84
RFFL-210ENST00000582308 RFX6Q8HWS3 928 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 CREG2Q8IUH2 290 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 RASGEF1CQ8N431 466 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 PLD5Q8N7P1 536 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 RTL3Q8N8U3 475 aaKnown RBP9.81□□□□□ -0.84
RFFL-210ENST00000582308 NETO2Q8NC67 525 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 KIF18AQ8NI77 898 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 DDI1Q8WTU0 396 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 BBS2Q9BXC9 721 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
RFFL-210ENST00000582308 NOL6Q9H6R4 1146 aaKnown RBP9.81□□□□□ -0.84
RFFL-210ENST00000582308 CATSPERBQ9H7T0 1116 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 ECT2Q9H8V3 914 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 NDFIP2Q9NV92 336 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 TMEM248Q9NWD8 314 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 SMARCAL1Q9NZC9 954 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 MARK1Q9P0L2 795 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 PRKAG3Q9UGI9 489 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 CLEC4EQ9ULY5 219 aa9.81□□□□□ -0.84
RFFL-210ENST00000582308 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 A0A1B0GVM2 712 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 TCAF2A6NFQ2 919 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 C19orf67A6NJJ6 358 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 NEDD8-MDP1E9PL57 170 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 PDE2AO00408 941 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 APOL1O14791 398 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 HOXC11O43248 304 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 CLDN11O75508 207 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 URI1O94763 535 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 TJP3O95049 919 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 LUC7L3O95232 432 aaKnown RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 ADH1CP00326 375 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 FGGP02679 453 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 CYBBP04839 570 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 ADH5P11766 374 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 TYRP14679 529 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 DYNLT1P63172 113 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 SLC10A2Q12908 348 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 KLF1Q13351 362 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 ZNF177Q13360 481 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 TFDP2Q14188 446 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 PAFAH1B3Q15102 231 aaKnown RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 SIX1Q15475 284 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 FSCBQ5H9T9 825 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 NCBP2-AS2Q69YL0 99 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 ASTLQ6HA08 431 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 TMCO3Q6UWJ1 677 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 NPNTQ6UXI9 565 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 ADAT2Q7Z6V5 191 aaKnown RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 ARHGAP12Q8IWW6 846 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 TP53INP2Q8IXH6 220 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 CARNMT1Q8N4J0 409 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 NPWQ8N729 165 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 OR52K2Q8NGK3 314 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 TTC8Q8TAM2 541 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 WFDC5Q8TCV5 224 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 ACTRT1Q8TDG2 376 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 ATXN2LQ8WWM7 1075 aaKnown RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 LMLNQ96KR4 655 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 ASB2Q96Q27 587 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 RETREG1Q9H6L5 497 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 BRD9Q9H8M2 597 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 PRDM16Q9HAZ2 1276 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 GTSE1Q9NYZ3 720 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 SAE1Q9UBE0 346 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 TTC7AQ9ULT0 858 aaPredicted RBP9.8□□□□□ -0.84
RFFL-210ENST00000582308 TBC1D30Q9Y2I9 924 aa9.8□□□□□ -0.84
RFFL-210ENST00000582308 TYW5A2RUC4 315 aaKnown RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 NARSO43776 548 aaKnown RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 MFSD11O43934 449 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 CACNG3O60359 315 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 PECAM1P16284 738 aaPredicted RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 ZFXP17010 805 aaPredicted RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 OR1E1P30953 314 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 GJA4P35212 333 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 MAPKAPK2P49137 400 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms