RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	TAF3	Q5VWG9	929 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	RNF219	Q5W0B1	726 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ZNF776	Q68DI1	518 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	PPP1R2P3	Q6NXS1	205 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	FBXL22	Q6P050	247 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	USP30	Q70CQ3	517 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	APTX	Q7Z2E3	356 aa	Known RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	BNIPL	Q7Z465	357 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CCAR2	Q8N163	923 aa	Known RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CFAP52	Q8N1V2	620 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CYB5D2	Q8WUJ1	264 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	MYEOV	Q96EZ4	313 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TOE1	Q96GM8	510 aa	Known RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TMEM9B	Q9NQ34	198 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	PRSS16	Q9NQE7	514 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TMEM63C	Q9P1W3	806 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TMEM59L	Q9UK28	342 aa		12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	INTS6	Q9UL03	887 aa	Known RBP	12.99	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	PI4KA	P42356	2102 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SPTBN2	O15020	2390 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CACNA1E	Q15878	2313 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	METTL12	A8MUP2	240 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	PAGE1	O75459	146 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ENDOD1	O94919	500 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	DNTT	P04053	509 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SYP	P08247	313 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SULT1E1	P49888	294 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CDH4	P55283	916 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	IRX4	P78413	519 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	FMO1	Q01740	532 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	GFPT1	Q06210	699 aa	Predicted RBP	12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ZNF177	Q13360	481 aa	Predicted RBP	12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ANO6	Q4KMQ2	910 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	FSCB	Q5H9T9	825 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	NAA35	Q5VZE5	725 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TCEAL6	Q6IPX3	200 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	LRRC31	Q6UY01	552 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SLC41A1	Q8IVJ1	513 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	AOPEP	Q8N6M6	819 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TCEAL3	Q969E4	200 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	MYO19	Q96H55	970 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	MRGPRX3	Q96LB0	322 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	HSPA12B	Q96MM6	686 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	RPRD1A	Q96P16	312 aa	Predicted RBP	12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	HAPLN3	Q96S86	360 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ZDHHC5	Q9C0B5	715 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	HSD3B7	Q9H2F3	369 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SMOC1	Q9H4F8	434 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CAPN10	Q9HC96	672 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	NLRC4	Q9NPP4	1024 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	RXFP3	Q9NSD7	469 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	PIGV	Q9NUD9	493 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TMEM74B	Q9NUR3	256 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TPX2	Q9ULW0	747 aa	Known RBP	12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ERVW-1	Q9UQF0	538 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TBC1D30	Q9Y2I9	924 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	HS3ST4	Q9Y661	456 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	DNAH14	Q0VDD8	3507 aa		12.98	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	EDDM13	A0A1B0GTR0	161 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	DCDC2B	A2VCK2	349 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	DRGX	A6NNA5	263 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	UPK3BL1	B0FP48	263 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	UPK3BL2	E5RIL1	263 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	EPHB6	O15197	1021 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	UNG	P13051	313 aa	Predicted RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	HLA-E	P13747	358 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CHRNB2	P17787	502 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	RDX	P35241	583 aa	Known RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	NSF	P46459	744 aa	Known RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	KLK7	P49862	253 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	RNASE9	P60153	205 aa	Known RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	RPS14	P62263	151 aa	Known RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CENPC	Q03188	943 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	FILIP1L	Q4L180	1135 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	OTUD1	Q5VV17	481 aa	Predicted RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CXorf57	Q6NSI4	855 aa	Known RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	LRSAM1	Q6UWE0	723 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ARMCX6	Q7L4S7	300 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SETD3	Q86TU7	594 aa	Predicted RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	PHF13	Q86YI8	300 aa	Predicted RBP	12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SLC20A1	Q8WUM9	679 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CPA5	Q8WXQ8	436 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	TKTL2	Q9H0I9	626 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SLC6A17	Q9H1V8	727 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	SGK2	Q9HBY8	427 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	OSGEP	Q9NPF4	335 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	COX16	Q9P0S2	106 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	NCKAP1	Q9Y2A7	1128 aa		12.97	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	IGLV3-10	A0A075B6K4	115 aa		12.96	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CXorf51A	A0A1B0GTR3	108 aa		12.96	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708		A0A1B0GTW7	788 aa		12.96	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708		A0A1W2PQC6	194 aa		12.96	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	C4orf47	A7E2U8	309 aa		12.96	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CDX4	O14627	284 aa	Predicted RBP	12.96	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	ADCY5	O95622	1261 aa		12.96	□□□□□ -0.33
CDK5RAP3-222	ENST00000581708	CALB1	P05937	261 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms