RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CLPBQ9H078 707 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 PRDM16Q9HAZ2 1276 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 SEMA5BQ9P283 1151 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 SERGEFQ9UGK8 458 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 SPATA31A1Q5TZJ5 1347 aa5.22□□□□□ -1.57
SMCHD1-205ENST00000581383 CYP3A7-CYP3A51PA0A087WV96 503 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 C3orf70A6NLC5 250 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 KCNU1A8MYU2 1149 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 BTBD19C9JJ37 291 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 POC1B-GALNT4F8VUJ3 575 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 GRM8O00222 908 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 KLK10O43240 276 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 HOXC11O43248 304 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 CSF1P09603 554 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 NHLRC4P0CG21 123 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 ACP5P13686 325 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 CD53P19397 219 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 CYP3A7P24462 503 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 SLC37A1P57057 533 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 SHC2P98077 582 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 TFF2Q03403 129 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 TLE2Q04725 743 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 CHRNDQ07001 517 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 CDK18Q07002 472 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 KLF9Q13886 244 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 KPNB1Q14974 876 aaKnown RBP5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 SLC4A8Q2Y0W8 1093 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 CERKLQ49MI3 558 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 MORN5Q5VZ52 161 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 NEK8Q86SG6 692 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 HEATR4Q86WZ0 1026 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 GALNT4Q8N4A0 578 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 QTRT1Q9BXR0 403 aaKnown RBP5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 PI4KBQ9UBF8 816 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 ANAPC4Q9UJX5 808 aa5.21□□□□□ -1.58
SMCHD1-205ENST00000581383 LMTK3Q96Q04 1460 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 VWA3AA6NCI4 1184 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 UBE2Q2LH0YL09 131 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 CNPP09543 421 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 XBP1P17861 261 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 TUBP50607 506 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 G3BP1Q13283 466 aaKnown RBP eCLIP5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 TRPC3Q13507 836 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 PFKFB3Q16875 520 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 MAP3K21Q5TCX8 1036 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 PXDC1Q5TGL8 231 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 KRTAP5-11Q6L8G4 156 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 TMEM88Q6PEY1 159 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 SLC2A7Q6PXP3 512 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 CHSY1Q86X52 802 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 C16orf71Q8IYS4 520 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 ANKRD44Q8N8A2 993 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 PRSS3P2Q8NHM4 247 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 KCNJ9Q92806 393 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 HVCN1Q96D96 273 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 ZNF845Q96IR2 970 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 RITA1Q96K30 269 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 REEP2Q9BRK0 252 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 HTATIP2Q9BUP3 242 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 TRIM2Q9C040 744 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 NUAK2Q9H093 628 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 OSBPL5Q9H0X9 879 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 WASH6PQ9NQA3 447 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 ARL8BQ9NVJ2 186 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 TMEM160Q9NX00 188 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 MTMR4Q9NYA4 1195 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 SLC13A4Q9UKG4 626 aa5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 SIRT4Q9Y6E7 314 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-205ENST00000581383 TUBB4AP04350 444 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 ALDOCP09972 364 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 RFPL3SP0C7P2 107 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 LYL1P12980 280 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 IGFBP2P18065 325 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 PNPLA4P41247 253 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 ARHGAP25P42331 645 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 ZNF84P51523 738 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 MAPK7Q13164 816 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 GPR162Q16538 588 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 PROSER3Q2NL68 480 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 CEP78Q5JTW2 689 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 CBWD5Q5RIA9 395 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 ATG16L1Q676U5 607 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 BBS12Q6ZW61 710 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 ADGRF3Q8IZF5 1079 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 USP38Q8NB14 1042 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 NAXEQ8NCW5 288 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 ADPRHL1Q8NDY3 354 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 HTRA1Q92743 480 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 CELF1Q92879 486 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 PPP1R10Q96QC0 940 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 SEC62Q99442 399 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 NPAS1Q99742 590 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 ABHD14AQ9BUJ0 271 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 GPR63Q9BZJ6 419 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 UBA5Q9GZZ9 404 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 SFXN1Q9H9B4 322 aa5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 TLR8Q9NR97 1041 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-205ENST00000581383 PRRT4C9JH25 899 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 TP73O15350 636 aa5.18□□□□□ -1.58
SMCHD1-205ENST00000581383 ANP32CO43423 234 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms