RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 WDR72Q3MJ13 1102 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 L1TD1Q5T7N2 865 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 MBLAC2Q68D91 279 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 CBWD2Q8IUF1 395 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 DENND1CQ8IV53 801 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 GPD1LQ8N335 351 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 ZNF276Q8N554 614 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 IFI44Q8TCB0 444 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 WFDC5Q8TCV5 224 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 MAPK15Q8TD08 544 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 WFIKKN2Q8TEU8 576 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 NOC3LQ8WTT2 800 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 RAD54LQ92698 747 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 ARRDC3Q96B67 414 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 ABCG4Q9H172 646 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 SDCBP2Q9H190 292 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 XYLT2Q9H1B5 865 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 SMYD3Q9H7B4 428 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 ABCB8Q9NUT2 735 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D7Q9P0N9 293 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 FZD4Q9ULV1 537 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 PLA2G4CQ9UP65 541 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 RP1P56715 2156 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 FBN3Q75N90 2809 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 ATP8B3O60423 1300 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 PIAS2O75928 621 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 PRPF6O94906 941 aaKnown RBP8□□□□□ -1.13
SMARCE1-217ENST00000580654 CYBBP04839 570 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 ITGA2BP08514 1039 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 DLDP09622 509 aaKnown RBP8□□□□□ -1.13
SMARCE1-217ENST00000580654 SLC5A2P31639 672 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 SLC8A1P32418 973 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 CASRP41180 1078 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 SGSHP51688 502 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 TNNC1P63316 161 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 E2F4Q16254 413 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 C9orf64Q5T6V5 341 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 ACOT1Q86TX2 421 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 IQCHQ86VS3 1027 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 WDR49Q8IV35 697 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 MMAAQ8IVH4 418 aaKnown RBP8□□□□□ -1.13
SMARCE1-217ENST00000580654 ARL14Q8N4G2 192 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 OR14C36Q8NHC7 312 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 WDR36Q8NI36 951 aaKnown RBP8□□□□□ -1.13
SMARCE1-217ENST00000580654 SLC2A14Q8TDB8 520 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 HPS3Q969F9 1004 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 ELMO3Q96BJ8 720 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 GRAMD1AQ96CP6 724 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 MRGPRX3Q96LB0 322 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 ACCSQ96QU6 501 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 SUN2Q9UH99 717 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 RASAL2Q9UJF2 1139 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 GGA2Q9UJY4 613 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 PLAAQ9Y263 795 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 R3HCC1Q9Y3T6 440 aaKnown RBP8□□□□□ -1.13
SMARCE1-217ENST00000580654 ZFHX3Q15911 3703 aa8□□□□□ -1.13
SMARCE1-217ENST00000580654 K7ESM1 405 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 NEBLO76041 1014 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 STAU1O95793 577 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 PABPC1P11940 636 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 GOT1P17174 413 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 MAT2AP31153 395 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 CD70P32970 193 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 DRD3P35462 400 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 MLLT3P42568 568 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 HARS2P49590 506 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 METAP1P53582 386 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 MYL6P60660 151 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 COG7P83436 770 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 EFEMP1Q12805 493 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 OVGP1Q12889 678 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 GNL2Q13823 731 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 HNRNPA1L2Q32P51 320 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 MPPE1Q53F39 396 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 GUSBP11Q6P575 273 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 CRTC1Q6UUV9 634 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 CLEC20AQ6ZU45 233 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 SND1Q7KZF4 910 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 VASH2Q86V25 355 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 AHI1Q8N157 1196 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 JAKMIP2Q96AA8 810 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 FAM131CQ96AQ9 280 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 LMLNQ96KR4 655 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 FAM129BQ96TA1 746 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 OMDQ99983 421 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 DCLK3Q9C098 648 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 MRPL44Q9H9J2 332 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 KLHL11Q9NVR0 708 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 WDR70Q9NW82 654 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 NLGN3Q9NZ94 848 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 HMGXB4Q9UGU5 601 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 CYTH4Q9UIA0 394 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 NAGPAQ9UK23 515 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 ACSL6Q9UKU0 697 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 EXOC7Q9UPT5 735 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 KIF3AQ9Y496 699 aa7.99□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3DA0A087WVF3 549 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3IA0A087WXS9 549 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3EA0A087X179 549 aa7.98□□□□□ -1.13
SMARCE1-217ENST00000580654 TBC1D3KA0A087X1G2 549 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms