RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ERICH1Q86X53 443 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 SLC2A14Q8TDB8 520 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 TSC1Q92574 1164 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 TMEM176AQ96HP8 235 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 KREMEN1Q96MU8 473 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 CIPCQ9C0C6 399 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 DNAI2Q9GZS0 605 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 LHX5Q9H2C1 402 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 EBF2Q9HAK2 575 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.15■□□□□ 0.82
LIMD2-209ENST00000580222 HMGXB4Q9UGU5 601 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 PCDHB4Q9Y5E5 795 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 TMEM131Q92545 1883 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 ATP8B3O60423 1300 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 IGHV4-34P06331 123 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 C7P10643 843 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 PLA2G4AP47712 749 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 POLR2FP61218 127 aaKnown RBP20.14■□□□□ 0.81
LIMD2-209ENST00000580222 ZNF394Q53GI3 561 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 DPY19L2P1Q6NXN4 242 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 SERPINA13PQ6UXR4 307 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 UBR7Q8N806 425 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 C12orf29Q8N999 325 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 SAP25Q8TEE9 199 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 BAP1Q92560 729 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 TNIP3Q96KP6 325 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 NT5C1AQ9BXI3 368 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 CLMPQ9H6B4 373 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 AJAP1Q9UKB5 411 aaPredicted RBP20.14■□□□□ 0.81
LIMD2-209ENST00000580222 SCML2Q9UQR0 700 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 DAAM1Q9Y4D1 1078 aa20.14■□□□□ 0.81
LIMD2-209ENST00000580222 WNT9AO14904 365 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 EPHB6O15197 1021 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 KRT5P13647 590 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 RPS14P62263 151 aaKnown RBP20.13■□□□□ 0.81
LIMD2-209ENST00000580222 C10orf120Q5SQS8 335 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 ANKS1BQ7Z6G8 1248 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 LURAP1LQ8IV03 231 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 EID2Q8N6I1 236 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 FAM181AQ8N9Y4 354 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 UCMAQ8WVF2 138 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 JAKMIP2Q96AA8 810 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 SLC6A18Q96N87 628 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 TWNKQ96RR1 684 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 FBXO44Q9H4M3 255 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 NLRC4Q9NPP4 1024 aa20.13■□□□□ 0.81
LIMD2-209ENST00000580222 GOLGA6L3A6NEY3 463 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 ERVH48-1M5A8F1 160 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 VILLO15195 856 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 HMBSP08397 361 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 PBX1P40424 430 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 GOLGA8FQ08AF8 430 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 GOLGA8DPQ0D2H9 430 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 LY6DQ14210 128 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 TAF1BQ53T94 588 aaPredicted RBP20.12■□□□□ 0.81
LIMD2-209ENST00000580222 KLHDC10Q6PID8 442 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 TMEM270Q6UE05 265 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 CYB5D2Q8WUJ1 264 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 NAF1Q96HR8 494 aaKnown RBP20.12■□□□□ 0.81
LIMD2-209ENST00000580222 SPAG5Q96R06 1193 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 ELF4Q99607 663 aaPredicted RBP20.12■□□□□ 0.81
LIMD2-209ENST00000580222 BTBD1Q9H0C5 482 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 TMEM245Q9H330 911 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 CPNE5Q9HCH3 593 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 FAM49BQ9NUQ9 324 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 AGO1Q9UL18 857 aaKnown RBP20.12■□□□□ 0.81
LIMD2-209ENST00000580222 PIEZO2Q9H5I5 2752 aa20.12■□□□□ 0.81
LIMD2-209ENST00000580222 C1SP09871 688 aa20.11■□□□□ 0.81
LIMD2-209ENST00000580222 USP8P40818 1118 aa20.11■□□□□ 0.81
LIMD2-209ENST00000580222 DRAP1Q14919 205 aaPredicted RBP20.11■□□□□ 0.81
LIMD2-209ENST00000580222 INAVAQ3KP66 663 aa20.11■□□□□ 0.81
LIMD2-209ENST00000580222 ADAT2Q7Z6V5 191 aaKnown RBP20.11■□□□□ 0.81
LIMD2-209ENST00000580222 SHC3Q92529 594 aa20.11■□□□□ 0.81
LIMD2-209ENST00000580222 NAA15Q9BXJ9 866 aaKnown RBP20.11■□□□□ 0.81
LIMD2-209ENST00000580222 ITIH6Q6UXX5 1313 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 CORO1AP31146 461 aaKnown RBP20.1■□□□□ 0.81
LIMD2-209ENST00000580222 ZNF75DP51815 510 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 RAD23BP54727 409 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 BNIP3Q12983 259 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 TBC1D25Q3MII6 688 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 STK33Q9BYT3 514 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 MTG2Q9H4K7 406 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 PRSS16Q9NQE7 514 aa20.1■□□□□ 0.81
LIMD2-209ENST00000580222 COL6A6A6NMZ7 2263 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 B8ZZF3 427 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 F8VZ95 297 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 DFNA5O60443 496 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 ITGAVP06756 1048 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 PNMA6AP0CW24 399 aaPredicted RBP20.09■□□□□ 0.81
LIMD2-209ENST00000580222 CD19P15391 556 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 ADORA2BP29275 332 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 BCAT1P54687 386 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 C21orf59P57076 290 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 RACK1P63244 317 aaKnown RBP20.09■□□□□ 0.81
LIMD2-209ENST00000580222 KCNC4Q03721 635 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 EIF4HQ15056 248 aaKnown RBP20.09■□□□□ 0.81
LIMD2-209ENST00000580222 ARHGAP40Q5TG30 622 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 CLEC20AQ6ZU45 233 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 DENND1CQ8IV53 801 aa20.09■□□□□ 0.81
LIMD2-209ENST00000580222 VSTM4Q8IW00 320 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms