RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ZNF48Q96MX3 618 aaPredicted RBP3.36□□□□□ -1.87
KPNB1-208ENST00000580019 UIMC1Q96RL1 719 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 DCLRE1CQ96SD1 692 aaKnown RBP3.36□□□□□ -1.87
KPNB1-208ENST00000580019 SOX7Q9BT81 388 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 HGH1Q9BTY7 390 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 MAK16Q9BXY0 300 aaKnown RBP3.36□□□□□ -1.87
KPNB1-208ENST00000580019 FTOQ9C0B1 505 aaKnown RBP eCLIP3.36□□□□□ -1.87
KPNB1-208ENST00000580019 HAPLN2Q9GZV7 340 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 VPS16Q9H269 839 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 MUC13Q9H3R2 512 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 SLC35C2Q9NQQ7 365 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 TMLHEQ9NVH6 421 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 RLIMQ9NVW2 624 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 POLR3BQ9NW08 1133 aaPredicted RBP3.36□□□□□ -1.87
KPNB1-208ENST00000580019 PPP1R14DQ9NXH3 145 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 AGTPBP1Q9UPW5 1226 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 NAALADL1Q9UQQ1 740 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 FRMPD1Q5SYB0 1578 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 SETBP1Q9Y6X0 1596 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 AKNAQ7Z591 1439 aa3.36□□□□□ -1.87
KPNB1-208ENST00000580019 PNMA6EA0A0J9YXQ4 647 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 AQP7P3A6NL99 342 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 TMEM233B4DJY2 109 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 STX16-NPEPL1H3BU86 382 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 STX16O14662 325 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SEPT4O43236 478 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SLC7A4O43246 635 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 TULP3O75386 442 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 UNC5CO95185 931 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 CSPG5O95196 566 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 GOSR1O95249 250 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 PGM3O95394 542 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 VIPP01282 170 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 ATP5BP06576 529 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 GRPP07492 148 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 VSIG10L2P0DP72 767 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 HLA-DPA1P20036 260 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SLC5A2P31639 672 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 AKT1P31749 480 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 HPDP32754 393 aaPredicted RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 CRHR1P34998 444 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 ARL1P40616 181 aaPredicted RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 RGS2P41220 211 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 LMAN1P49257 510 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 PTTG1IPP53801 180 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 RAD23AP54725 363 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 UCP3P55916 312 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 WNT3AP56704 352 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 UBXN2AP68543 259 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 MRPS35P82673 323 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 TBL3Q12788 808 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 EIF2B5Q13144 721 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 MTM1Q13496 603 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 DCTN2Q13561 401 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 KYNUQ16719 465 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 INSCQ1MX18 579 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 MMEL1Q495T6 779 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 BMP2KLQ5H9B9 411 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 METTL24Q5JXM2 366 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 IYDQ6PHW0 289 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SYT13Q7L8C5 426 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 GDF7Q7Z4P5 450 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 CEP97Q8IW35 865 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 THNSL1Q8IYQ7 743 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SLC44A3Q8N4M1 653 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 ZGPATQ8N5A5 531 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 ANKRD44Q8N8A2 993 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 POMGNT2Q8NAT1 580 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 GSDMBQ8TAX9 411 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 METTL6Q8TCB7 284 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 NOC3LQ8WTT2 800 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 N4BP2L2Q92802 583 aaPredicted RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 GBP5Q96PP8 586 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 PIGSQ96S52 555 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 NDC1Q9BTX1 674 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 ALOXE3Q9BYJ1 711 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 CPEB1Q9BZB8 566 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 TRIM5Q9C035 493 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 MS4A7Q9GZW8 240 aaPredicted RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SIK2Q9H0K1 926 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 C11orf54Q9H0W9 315 aaPredicted RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 RANBP17Q9H2T7 1088 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 FAM83DQ9H4H8 585 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 LDAHQ9H6V9 325 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 BRF2Q9HAW0 419 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 XPNPEP3Q9NQH7 507 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 MTMR4Q9NYA4 1195 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SAE1Q9UBE0 346 aaPredicted RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 XPO7Q9UIA9 1087 aaKnown RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 MOSPD1Q9UJG1 213 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 AJAP1Q9UKB5 411 aaPredicted RBP3.35□□□□□ -1.87
KPNB1-208ENST00000580019 BAG5Q9UL15 447 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 HSF4Q9ULV5 492 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 NFU1Q9UMS0 254 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SUFUQ9UMX1 484 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 ZNF804BA4D1E1 1349 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 MAST3O60307 1309 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 SIGLEC1Q9BZZ2 1709 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 PTPRKQ15262 1439 aa3.35□□□□□ -1.87
KPNB1-208ENST00000580019 CAMSAP1Q5T5Y3 1602 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms