RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 SCAMP3O14828 347 aaKnown RBP11.04□□□□□ -0.64
SS18-213ENST00000579640 MCF2LO15068 1137 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 TSPAN3O60637 253 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 TBL1XO60907 577 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 CNTN5O94779 1100 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 SLU7O95391 586 aaKnown RBP11.04□□□□□ -0.64
SS18-213ENST00000579640 FNTAP49354 379 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 NDST2P52849 883 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 RPS24P62847 133 aaKnown RBP11.04□□□□□ -0.64
SS18-213ENST00000579640 TUBB4BP68371 445 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 FCHO2Q0JRZ9 810 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 ZNF177Q13360 481 aaPredicted RBP11.04□□□□□ -0.64
SS18-213ENST00000579640 PDK1Q15118 436 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 C6orf118Q5T5N4 469 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 TANGO2Q6ICL3 276 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 C1orf228Q6PIY5 440 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 SETD3Q86TU7 594 aaPredicted RBP11.04□□□□□ -0.64
SS18-213ENST00000579640 LRRC49Q8IUZ0 686 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 CCDC117Q8IWD4 279 aaPredicted RBP11.04□□□□□ -0.64
SS18-213ENST00000579640 UMODL1-AS1Q8N2C9 162 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 PLCD3Q8N3E9 789 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 DDI1Q8WTU0 396 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 IRF7Q92985 503 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 RSPRY1Q96DX4 576 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 MYEOVQ96EZ4 313 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 DTLQ9NZJ0 730 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 MARK1Q9P0L2 795 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 ZNF212Q9UDV6 495 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 FEZ2Q9UHY8 353 aaPredicted RBP11.04□□□□□ -0.64
SS18-213ENST00000579640 NR2E1Q9Y466 385 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 HEY1Q9Y5J3 304 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
SS18-213ENST00000579640 HACD1B0YJ81 288 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 TRDMT1O14717 391 aaKnown RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 PPP1R12AO14974 1030 aaPredicted RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 MFSD11O43934 449 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 NFATC1O95644 943 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 PECAM1P16284 738 aaPredicted RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 OR1E1P30953 314 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 IRAK1P51617 712 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 VCPP55072 806 aaKnown RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 OXCT1P55809 520 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 YBEYP58557 167 aaPredicted RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 LMNB2Q03252 620 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 GBE1Q04446 702 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 SMAD2Q15796 467 aaKnown RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 AFMIDQ63HM1 303 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 VITQ6UXI7 678 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 NPNTQ6UXI9 565 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 ZNF783Q6ZMS7 281 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 YAF2Q8IY57 180 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 ADGRG2Q8IZP9 1017 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 CFAP52Q8N1V2 620 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 SLC35B2Q8TB61 432 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 C1orf54Q8WWF1 131 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 ATP2A3Q93084 1043 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 NKD2Q969F2 451 aaPredicted RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 MAGOHBQ96A72 148 aaKnown RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 HAUS1Q96CS2 278 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 OLFM3Q96PB7 478 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 LRRC3BQ96PB8 259 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 KLC2Q9H0B6 622 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 SPHK2Q9NRA0 654 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 RBM12Q9NTZ6 932 aaKnown RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 DRG1Q9Y295 367 aaKnown RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 TBC1D30Q9Y2I9 924 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 R3HDM2Q9Y2K5 976 aaKnown RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 WNT6Q9Y6F9 365 aa11.03□□□□□ -0.64
SS18-213ENST00000579640 KIF26AQ9ULI4 1882 aaPredicted RBP11.03□□□□□ -0.64
SS18-213ENST00000579640 ANHXE9PGG2 379 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 LIASO43766 372 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 RAMP2O60895 175 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 LUC7L3O95232 432 aaKnown RBP11.02□□□□□ -0.64
SS18-213ENST00000579640 ADH1CP00326 375 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 PENKP01210 267 aaPredicted RBP11.02□□□□□ -0.64
SS18-213ENST00000579640 PSMC3P17980 439 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 ETFBP38117 255 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 SGSHP51688 502 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 EIF3EP60228 445 aaKnown RBP11.02□□□□□ -0.64
SS18-213ENST00000579640 ZNF33AQ06730 810 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 C2orf54Q08AI8 447 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 GALNT2Q10471 571 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 BYSLQ13895 437 aaKnown RBP11.02□□□□□ -0.64
SS18-213ENST00000579640 EML3Q32P44 896 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 PARP15Q460N3 678 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 FYB2Q5VWT5 728 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 PARM1Q6UWI2 310 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 TPGS1Q6ZTW0 290 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 TFAP2DQ7Z6R9 452 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 CIR1Q86X95 450 aaPredicted RBP11.02□□□□□ -0.64
SS18-213ENST00000579640 CDKL3Q8IVW4 592 aaPredicted RBP11.02□□□□□ -0.64
SS18-213ENST00000579640 MMGT1Q8N4V1 131 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 NPWQ8N729 165 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 GRK7Q8WTQ7 553 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 NXPE3Q969Y0 559 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 FAM83CQ9BQN1 747 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 LINC00597Q9H2U6 94 aa11.02□□□□□ -0.64
SS18-213ENST00000579640 SAE1Q9UBE0 346 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms