RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, human

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-211	ENST00000578187	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.22	□□□□□ -0.29	9e-7	■■■□□ 18.9
CCDC57-211	ENST00000578187	RAD54B	Q9Y620	910 aa		13.22	□□□□□ -0.29
CCDC57-211	ENST00000578187	STON1	Q9Y6Q2	735 aa		13.22	□□□□□ -0.29
CCDC57-211	ENST00000578187	DOCK4	Q8N1I0	1966 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	GOLGA6L7	A0A1B0GV03	622 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TCRBV5S1A1T	A0A578	114 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	MOCS2	O96007	188 aa	Predicted RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	SERPINF2	P08697	491 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	ACADM	P11310	421 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TFE3	P19532	575 aa	Predicted RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TNFAIP3	P21580	790 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	CCR1	P32246	355 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	RDX	P35241	583 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	RNASE9	P60153	205 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	MTA1	Q13330	715 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TRIM14	Q14142	442 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	WDR45B	Q5MNZ6	344 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	MPP7	Q5T2T1	576 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	PIK3R6	Q5UE93	754 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	SPECC1L	Q69YQ0	1117 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	KIAA1211L	Q6NV74	962 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	RFWD3	Q6PCD5	774 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	VSTM4	Q8IW00	320 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	ATP6V0D2	Q8N8Y2	350 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	MRGPRX1	Q96LB2	322 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	HSPA12B	Q96MM6	686 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	DDX50	Q9BQ39	737 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	GTPBP2	Q9BX10	602 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	CIPC	Q9C0C6	399 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	PRDM16	Q9HAZ2	1276 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	PIGV	Q9NUD9	493 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TMEM74B	Q9NUR3	256 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TMEM51	Q9NW97	253 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	TAS2R14	Q9NYV8	317 aa		13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	XPO7	Q9UIA9	1087 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	LUC7L2	Q9Y383	392 aa	Known RBP	13.21	□□□□□ -0.29
CCDC57-211	ENST00000578187	CKAP5	Q14008	2032 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	LAMA1	P25391	3075 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	TYW5	A2RUC4	315 aa	Known RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	C2CD4B	A6NLJ0	364 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	MEI4	A8MW99	385 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	DDX3X	O00571	662 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	CDX4	O14627	284 aa	Predicted RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	TSPAN3	O60637	253 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	OPHN1	O60890	802 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	F9	P00740	461 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	GZMA	P12544	262 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	SKIL	P12757	684 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	CD6	P30203	668 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	OXTR	P30559	389 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	CASP14	P31944	242 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	PTPN9	P43378	593 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	CXCR3	P49682	368 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	NME3	Q13232	169 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	MS4A13	Q5J8X5	152 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	BRMS1L	Q5PSV4	323 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	PPP1R15B	Q5SWA1	713 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	RAP1GAP2	Q684P5	730 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	SERPINA13P	Q6UXR4	307 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	MCOLN2	Q8IZK6	566 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	DEFB119	Q8N690	84 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	EMC1	Q8N766	993 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	ZNF557	Q8N988	423 aa	Predicted RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	HJURP	Q8NCD3	748 aa	Predicted RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	JOSD2	Q8TAC2	188 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	CPLX3	Q8WVH0	158 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	PRCC	Q92733	491 aa	Predicted RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	ERLEC1	Q96DZ1	483 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	TMA16	Q96EY4	203 aa	Known RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	MYEOV	Q96EZ4	313 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	MS4A3	Q96HJ5	214 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	VCPIP1	Q96JH7	1222 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	CFAP57	Q96MR6	1250 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	TBCB	Q99426	244 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	PRMT1	Q99873	361 aa	Known RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	ELOVL2	Q9NXB9	296 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	ARHGEF38	Q9NXL2	777 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	COX16	Q9P0S2	106 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	HCN2	Q9UL51	889 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	CLEC4E	Q9ULY5	219 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	PLA2G4C	Q9UP65	541 aa		13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	BZW2	Q9Y6E2	419 aa	Known RBP	13.2	□□□□□ -0.3
CCDC57-211	ENST00000578187	ENDOD1	O94919	500 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	GJB6	O95452	261 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	SERPING1	P05155	500 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	KRT3	P12035	628 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	ABCB4	P21439	1286 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	TACR2	P21452	398 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	HNRNPH3	P31942	346 aa	Known RBP	13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	DEUP1	Q05D60	604 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	ARID5B	Q14865	1188 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	GEN1	Q17RS7	908 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	FUT11	Q495W5	492 aa		13.19	□□□□□ -0.3
CCDC57-211	ENST00000578187	TDRD12	Q587J7	1177 aa	Known RBP	13.19	□□□□□ -0.3

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