RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 AUHQ13825 339 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 HNRNPA1L2Q32P51 320 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 SLC25A52Q3SY17 297 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 FKBP15Q5T1M5 1219 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 SYCP2LQ5T4T6 812 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 TAF3Q5VWG9 929 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 DAB2IPQ5VWQ8 1189 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 CXorf57Q6NSI4 855 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 FBXL22Q6P050 247 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 CCDC117Q8IWD4 279 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 ZNF366Q8N895 744 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 ERGIC2Q96RQ1 377 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 RSPH9Q9H1X1 276 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 ARHGEF38Q9NXL2 777 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 TMEM59LQ9UK28 342 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 HS3ST4Q9Y661 456 aa12.85□□□□□ -0.35
CSNK1D-206ENST00000577578 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 CHD5Q8TDI0 1954 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 METTL12A8MUP2 240 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 H0Y626 953 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 PAGE1O75459 146 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 MOCS3O95396 460 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 F9P00740 461 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ACADMP11310 421 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 CHRNB2P17787 502 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 TFE3P19532 575 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 MMP8P22894 467 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 FLT3P36888 993 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 OXCT1P55809 520 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ST8SIA6P61647 398 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ECT2LQ008S8 904 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 FMO1Q01740 532 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 NME3Q13232 169 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 SYCP1Q15431 976 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 WDR45BQ5MNZ6 344 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 RABGAP1LQ5R372 815 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 FAM102AQ5T9C2 384 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 TRNP1Q6NT89 227 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 APCDD1Q8J025 514 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 MSANTD4Q8NCY6 345 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 C1orf216Q8TAB5 229 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 SLC20A1Q8WUM9 679 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 RNF34Q969K3 372 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 IGSF8Q969P0 613 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ALG14Q96F25 216 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 GPR174Q9BXC1 333 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ANLNQ9NQW6 1124 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 SUSD2Q9UGT4 822 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 SCML1Q9UN30 329 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 ERVW-1Q9UQF0 538 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 TBC1D30Q9Y2I9 924 aa12.84□□□□□ -0.35
CSNK1D-206ENST00000577578 MAP1BP46821 2468 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 C10orf142B7Z368 130 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 SIN3BO75182 1162 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 GFPT2O94808 682 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 KCNK5O95279 499 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 CFIP05156 583 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 CSRP1P21291 193 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 CTSOP43234 321 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 IRAK1P51617 712 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 GFPT1Q06210 699 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 TYRO3Q06418 890 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 SULT2A1Q06520 285 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 ARTNQ5T4W7 220 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 C9orf64Q5T6V5 341 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 ACBD5Q5T8D3 534 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 NAA35Q5VZE5 725 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 TRIM72Q6ZMU5 477 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 USP30Q70CQ3 517 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 CIR1Q86X95 450 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 CACUL1Q86Y37 369 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 CPA5Q8WXQ8 436 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 RPRD1AQ96P16 312 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 TKTL2Q9H0I9 626 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 MTG2Q9H4K7 406 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 WDCPQ9H6R7 721 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 NLRC4Q9NPP4 1024 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 COX16Q9P0S2 106 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 VANGL2Q9ULK5 521 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 OR51B4Q9Y5P0 310 aa12.83□□□□□ -0.36
CSNK1D-206ENST00000577578 IGLV3-10A0A075B6K4 115 aa12.82□□□□□ -0.36
CSNK1D-206ENST00000577578 UPK3BL1B0FP48 263 aa12.82□□□□□ -0.36
CSNK1D-206ENST00000577578 UPK3BL2E5RIL1 263 aa12.82□□□□□ -0.36
CSNK1D-206ENST00000577578 ARHGAP33O14559 1287 aa12.82□□□□□ -0.36
CSNK1D-206ENST00000577578 CLDN11O75508 207 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms