RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SLC8A3P57103 927 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 RPS24P62847 133 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 E2F1Q01094 437 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 RHDQ02161 417 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 ADIGQ0VDE8 80 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 GOLGA7BQ2TAP0 167 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 SLC45A4Q5BKX6 768 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 MPP7Q5T2T1 576 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 NADSYN1Q6IA69 706 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 CFAP52Q8N1V2 620 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 STK40Q8N2I9 435 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 MFSD2AQ8NA29 543 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 FOXD4L4Q8WXT5 416 aaPredicted RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 PTPRN2Q92932 1015 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 PAGE5Q96GU1 130 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 RPL10LQ96L21 214 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 ZNF396Q96N95 335 aaPredicted RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 ABCC13Q9NSE7 274 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 TSPAN16Q9UKR8 245 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 FZD4Q9ULV1 537 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 PCDHA7Q9UN72 937 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 CA5BQ9Y2D0 317 aa10.49□□□□□ -0.73
NPLOC4-220ENST00000576940 COL6A6A6NMZ7 2263 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 XPO1O14980 1071 aaKnown RBP10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 KLK10O43240 276 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 CALUO43852 315 aaPredicted RBP10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 GABBR2O75899 941 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 IL1BP01584 269 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 ASLP04424 464 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 VAV1P15498 845 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 PCBP4P57723 403 aaKnown RBP10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 TMPRSS3P57727 454 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 DAB2P98082 770 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 KCNC4Q03721 635 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 POM121L1PQ3SYA9 428 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 PKDCCQ504Y2 493 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 PITRM1Q5JRX3 1037 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 KRT39Q6A163 491 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 NAPEPLDQ6IQ20 393 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 INTS8Q75QN2 995 aaKnown RBP10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 TMC6Q7Z403 805 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 PRPF39Q86UA1 669 aaKnown RBP10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 UNC45BQ8IWX7 931 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 APCDD1Q8J025 514 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 WBP1Q96G27 269 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 HIC2Q96JB3 615 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 PRICKLE1Q96MT3 831 aaPredicted RBP10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 ZNF578Q96N58 590 aaPredicted RBP10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 OSBPL2Q9H1P3 480 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 CLMPQ9H6B4 373 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 TMEM8AQ9HCN3 771 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 EXOC1Q9NV70 894 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 UCKL1Q9NWZ5 548 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 FAM13BQ9NYF5 915 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 MAPK8IP1Q9UQF2 711 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 TRAF3IP3Q9Y228 551 aa10.48□□□□□ -0.73
NPLOC4-220ENST00000576940 HECTD1Q9ULT8 2610 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 EDDM13A0A1B0GTR0 161 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 MAPK13O15264 365 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 ARHGAP6O43182 974 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 IRAK2O43187 625 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 LATO43561 262 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 RTN2O75298 545 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 USP12O75317 370 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 YEATS4O95619 227 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 IGLV3-27P01718 113 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 SRPRAP08240 638 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 KRT13P13646 458 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 C5AR1P21730 350 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 NR2F2P24468 414 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 DRD3P35462 400 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 SLC11A2P49281 568 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 RGS7P49802 495 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 STK19P49842 368 aaPredicted RBP10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 TBX4P57082 545 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 DAOAP59103 153 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 GABREP78334 506 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 ECT2LQ008S8 904 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 ZNF211Q13398 564 aaPredicted RBP10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 ADAM9Q13443 819 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 STAT4Q14765 748 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 ARID5BQ14865 1188 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 BROXQ5VW32 411 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 RESP18Q5W5W9 173 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 FAM186BQ8IYM0 893 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 CEP57L1Q8IYX8 460 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 SIX6OS1Q8N1H7 587 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 OXR1Q8N573 874 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 KDM1BQ8NB78 822 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 CLEC4CQ8WTT0 213 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 TTC9Q92623 222 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 NUCKS1Q9H1E3 243 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 UPF2Q9HAU5 1272 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 RAB20Q9NX57 234 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 SARDHQ9UL12 918 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 CEP83Q9Y592 693 aa10.47□□□□□ -0.73
NPLOC4-220ENST00000576940 TDRD6O60522 2096 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms