RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 FAM162AQ96A26 154 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 RNF145Q96MT1 663 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SNX15Q9NRS6 342 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 AP4S1Q9Y587 144 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SNCAIPQ9Y6H5 919 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 TYW5A2RUC4 315 aaKnown RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 MTSS1O43312 755 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 ATXN1P54253 815 aaKnown RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 POU4F1Q01851 419 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 DMC1Q14565 340 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 PPP1R26Q5T8A7 1209 aaPredicted RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 B3GNT6Q6ZMB0 384 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 PLD3Q8IV08 490 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 PLD5Q8N7P1 536 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 CDHR5Q9HBB8 845 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 PCDH18Q9HCL0 1135 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 MYRFQ9Y2G1 1151 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 ZNF536O15090 1300 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 DISP2A7MBM2 1401 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 TBC1D4O60343 1298 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 MAN1A2O60476 641 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 SIN3BO75182 1162 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 WFS1O76024 890 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 CCR1P32246 355 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 MRPS15P82914 257 aaKnown RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 CCDC153Q494R4 210 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 SV2CQ496J9 727 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 STK32CQ86UX6 486 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 MYO1HQ8N1T3 1032 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 PARP8Q8N3A8 854 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 CALML6Q8TD86 181 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 ERLEC1Q96DZ1 483 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 LENG8Q96PV6 779 aaPredicted RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 POMKQ9H5K3 350 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 CHCHD3Q9NX63 227 aaKnown RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 MAP3K20Q9NYL2 800 aaKnown RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 CASTOR2A6NHX0 329 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 RPL5P46777 297 aaKnown RBP18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 DLG2Q15700 870 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 GPR162Q16538 588 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 KYAT1Q16773 422 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 C6orf52Q5T4I8 152 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 GRTP1Q5TC63 336 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 LINC00523Q86TU6 105 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 KBTBD2Q8IY47 623 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 BANPQ8N9N5 519 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 HERPUD2Q9BSE4 406 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 SPATC1LQ9H0A9 340 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 PIDD1Q9HB75 910 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 S100A14Q9HCY8 104 aa18.24■□□□□ 0.51
ATPAF1-214ENST00000576409 CYP2B6P20813 491 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 IL1R2P27930 398 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 RGS2P41220 211 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 AQP4P55087 323 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 TRAF2Q12933 501 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 RALGDSQ12967 914 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CERCAMQ5T4B2 595 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 TSPAN14Q8NG11 270 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 LRRC39Q96DD0 335 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 RPRD1AQ96P16 312 aaPredicted RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 PHF12Q96QT6 1004 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 AAASQ9NRG9 546 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 PNMA8BQ9ULN7 279 aaPredicted RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 PKP3Q9Y446 797 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 ZSCAN9O15535 394 aaPredicted RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 C2P06681 752 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 USP17L7P0C7H9 530 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 RTP1P59025 263 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 SAPCD2Q86UD0 394 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CHSY1Q86X52 802 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 MAGEE2Q8TD90 523 aaPredicted RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 GFM2Q969S9 779 aaKnown RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 ASIC4Q96FT7 647 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 ZNF333Q96JL9 665 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CPNE1Q99829 537 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 ASPSCR1Q9BZE9 553 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 UBR1Q8IWV7 1749 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 C16orf96A6NNT2 1141 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 TMCC1O94876 653 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 MT-ND1P03886 318 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CD151P48509 253 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 HADHBP55084 474 aaKnown RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CDH17Q12864 832 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 HSDL1Q3SXM5 330 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 FAM83AQ86UY5 434 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 HEATR4Q86WZ0 1026 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 TUBGCP5Q96RT8 1024 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 ACO2Q99798 780 aaKnown RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 MID1IP1Q9NPA3 183 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 NSMCE4AQ9NXX6 385 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 GALNT8Q9NY28 637 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 PPM1HQ9ULR3 514 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 CXorf49A8MYA2 514 aaPredicted RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 FASP25445 335 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 LRPAP1P30533 357 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 KLF10Q13118 480 aa18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 DCTN2Q13561 401 aaKnown RBP18.23■□□□□ 0.51
ATPAF1-214ENST00000576409 DDX39BQ13838 428 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms