RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SRPRAP08240 638 aaKnown RBP10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 KRT13P13646 458 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 C5AR1P21730 350 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 CTSOP43234 321 aaPredicted RBP10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 ME1P48163 572 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 SLC11A2P49281 568 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 DAOAP59103 153 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 CXADRP78310 365 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 CCDC173Q0VFZ6 552 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 BST2Q10589 180 aaKnown RBP10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 GOLGA7BQ2TAP0 167 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 PKDCCQ504Y2 493 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 FSCBQ5H9T9 825 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 NUGGCQ68CJ6 796 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 NADSYN1Q6IA69 706 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 SND1Q7KZF4 910 aaKnown RBP eCLIP10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 IQCHQ86VS3 1027 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 MFN1Q8IWA4 741 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 FBXL13Q8NEE6 735 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 OR14C36Q8NHC7 312 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 MYEOVQ96EZ4 313 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 HIC2Q96JB3 615 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 PRICKLE1Q96MT3 831 aaPredicted RBP10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 MMRN2Q9H8L6 949 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 CNGB3Q9NQW8 809 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 STIM2Q9P246 746 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 SLCO3A1Q9UIG8 710 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 ERVW-1Q9UQF0 538 aa10.34□□□□□ -0.75
CALCOCO2-227ENST00000575560 ITIH6Q6UXX5 1313 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 EDDM13A0A1B0GTR0 161 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 ADH1BP00325 375 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 MYL1P05976 194 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 RPL13P26373 211 aaKnown RBP10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 DRD3P35462 400 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 PPP2CBP62714 309 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 RPS24P62847 133 aaKnown RBP10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 PPP2CAP67775 309 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 ECT2LQ008S8 904 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 E2F1Q01094 437 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 ZNF211Q13398 564 aaPredicted RBP10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 ADAM9Q13443 819 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 SGO2Q562F6 1265 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 SLC45A4Q5BKX6 768 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 PITRM1Q5JRX3 1037 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 NAPEPLDQ6IQ20 393 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 MMS22LQ6ZRQ5 1243 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 SLC25A45Q8N413 288 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 HJURPQ8NCD3 748 aaPredicted RBP10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 UBA3Q8TBC4 463 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 SLC35F5Q8WV83 523 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 IRGQQ8WZA9 623 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 PTPRN2Q92932 1015 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 KDM4CQ9H3R0 1056 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 MYO18BQ8IUG5 2567 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 COL12A1Q99715 3063 aa10.33□□□□□ -0.76
CALCOCO2-227ENST00000575560 NAV2Q8IVL1 2488 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3DA0A087WVF3 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3IA0A087WXS9 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3EA0A087X179 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3KA0A087X1G2 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3FA6NER0 549 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3LB9A6J9 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 O00370 1275 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TRIM38O00635 465 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 SIGLEC6O43699 453 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 DXOO77932 396 aaKnown RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 MT-CO3P00414 261 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 FYNP06241 537 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3HP0C7X1 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 SETSIPP0DME0 302 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 VDRP11473 427 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 LCP1P13796 627 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 MZF1P28698 734 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 NUDT1P36639 197 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 PSMD8P48556 350 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBX4P57082 545 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 RHDQ02161 417 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 OVGP1Q12889 678 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 ZCWPW2Q504Y3 356 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 MS4A13Q5J8X5 152 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3GQ6DHY5 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3CQ6IPX1 549 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 PRPF39Q86UA1 669 aaKnown RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 TBC1D3Q8IZP1 549 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 SIX6OS1Q8N1H7 587 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 STK40Q8N2I9 435 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 CARNMT1Q8N4J0 409 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 ZNF248Q8NDW4 579 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 EEF2KMTQ96G04 330 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 SLC39A13Q96H72 371 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 FCRL2Q96LA5 508 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 ZNF578Q96N58 590 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 DDX50Q9BQ39 737 aaKnown RBP10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 HESX1Q9UBX0 185 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 CYTH4Q9UIA0 394 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 RCOR1Q9UKL0 485 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 KIAA1257Q9ULG3 409 aa10.32□□□□□ -0.76
CALCOCO2-227ENST00000575560 MAPK8IP1Q9UQF2 711 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms