RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 EPHX3Q9H6B9 360 aa14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 LTB4R2Q9NPC1 389 aa14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 KLHL11Q9NVR0 708 aa14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 TRMT1Q9NXH9 659 aaKnown RBP14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 DDX56Q9NY93 547 aaKnown RBP14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 DONSONQ9NYP3 566 aa14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 CLEC4EQ9ULY5 219 aa14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 CHD5Q8TDI0 1954 aa14.94□□□□□ -0.02
NPLOC4-218ENST00000574964 LRRD1A4D1F6 860 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 FAM170BA6NMN3 283 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 TRIM24O15164 1050 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 FGF10O15520 208 aaPredicted RBP14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 PSTPIP1O43586 416 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 KRT1P04264 644 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 RHOCP08134 193 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 CISD3P0C7P0 127 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 PABPC1P11940 636 aaKnown RBP14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 RHOQP17081 205 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 GOT1P17174 413 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 SEMA3BQ13214 749 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 LRRC32Q14392 662 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 PDK2Q15119 407 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 TMEM196Q5HYL7 178 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 DGKKQ5KSL6 1271 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 C6orf118Q5T5N4 469 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 MANEALQ5VSG8 457 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 LRRC38Q5VT99 294 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 FSTL4Q6MZW2 842 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 ANKS1BQ7Z6G8 1248 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 TERB1Q8NA31 727 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 CCDC26Q8TAB7 109 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 WFIKKN2Q8TEU8 576 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 UCMAQ8WVF2 138 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 P2RY11Q96G91 374 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 RETREG1Q9H6L5 497 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 PCDH18Q9HCL0 1135 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 FBRSL1Q9HCM7 1045 aaKnown RBP14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 ABCB8Q9NUT2 735 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 GGA2Q9UJY4 613 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 FBXO10Q9UK96 956 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 SLC27A6Q9Y2P4 619 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 CAPN6Q9Y6Q1 641 aa14.93□□□□□ -0.02
NPLOC4-218ENST00000574964 BDP1A6H8Y1 2624 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 EGFP01133 1207 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 KDELR1P24390 212 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 TARSP26639 723 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 HLA-FP30511 346 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 CD70P32970 193 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 MAPKAPK2P49137 400 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 LMAN2Q12907 356 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 FBXO43Q4G163 708 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 RFX8Q6ZV50 586 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 SETD3Q86TU7 594 aaPredicted RBP14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 AHI1Q8N157 1196 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 WFDC5Q8TCV5 224 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 PBXIP1Q96AQ6 731 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 CIPCQ9C0C6 399 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 MUC3BQ9H195 1237 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 LMAN1LQ9HAT1 526 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 CWC15Q9P013 229 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 DNAI1Q9UI46 699 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 PYCARDQ9ULZ3 195 aa14.92□□□□□ -0.02
NPLOC4-218ENST00000574964 CCDC66A2RUB6 948 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 GOLGA6L9A6NEM1 432 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 FTCDO95954 541 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 PDGFBP01127 241 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 ERCC2P18074 760 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 POLR2EP19388 210 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 AMPD1P23109 780 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 HOXC13P31276 330 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 CSKP41240 450 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 TNFRSF4P43489 277 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 HCAR3P49019 387 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 SEC13P55735 322 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 SLC12A1Q13621 1099 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 DMC1Q14565 340 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 GEN1Q17RS7 908 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 FSCBQ5H9T9 825 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 RNF219Q5W0B1 726 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 RNF43Q68DV7 783 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 ZNF354CQ86Y25 554 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 CCDC50Q8IVM0 306 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 UBL4BQ8N7F7 174 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 RTL3Q8N8U3 475 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 LRRC57Q8N9N7 239 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 RNF25Q96BH1 459 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 SPON2Q9BUD6 331 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 MAK16Q9BXY0 300 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 OSBPL6Q9BZF3 934 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 TMEM248Q9NWD8 314 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 RCOR3Q9P2K3 495 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 TBC1D30Q9Y2I9 924 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 SIT1Q9Y3P8 196 aa14.91□□□□□ -0.02
NPLOC4-218ENST00000574964 SHISA7A6NL88 538 aa14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 MIF4GDA9UHW6 222 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-218ENST00000574964 TIMM44O43615 452 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms