RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 FAM102AQ5T9C2 384 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ZNF776Q68DI1 518 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 NOP9Q86U38 636 aaKnown RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 NEK11Q8NG66 645 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ERLEC1Q96DZ1 483 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 GPR174Q9BXC1 333 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ZDHHC5Q9C0B5 715 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 WDCPQ9H6R7 721 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 CAPN10Q9HC96 672 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 PRSS16Q9NQE7 514 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 FAM207AQ9NSI2 230 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 XPO7Q9UIA9 1087 aaKnown RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ERVW-1Q9UQF0 538 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ITIH6Q6UXX5 1313 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 SYNJ2BP-COX16A0A087WUM0 186 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 EDDM13A0A1B0GTR0 161 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 METTL12A8MUP2 240 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 MEI4A8MW99 385 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 CDX4O14627 284 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 CLDN11O75508 207 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 ENGP17813 658 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 CSRP1P21291 193 aaKnown RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 CXCR3P49682 368 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 JAM2P57087 298 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 NOMO3P69849 1222 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 AUHQ13825 339 aaKnown RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 C5orf22Q49AR2 442 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 FSCBQ5H9T9 825 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 TAF3Q5VWG9 929 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 FBXL22Q6P050 247 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 USP30Q70CQ3 517 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 XYLT1Q86Y38 959 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 CCAR2Q8N163 923 aaKnown RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 PCMTD1Q96MG8 357 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 RPRD1AQ96P16 312 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 RSPH9Q9H1X1 276 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 COX16Q9P0S2 106 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 INTS6Q9UL03 887 aaKnown RBP17.02■□□□□ 0.32
TVP23B-206ENST00000574226 NCKAP1Q9Y2A7 1128 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 SIK3Q9Y2K2 1263 aa17.02■□□□□ 0.32
TVP23B-206ENST00000574226 ASCC3Q8N3C0 2202 aaKnown RBP17.01■□□□□ 0.31
TVP23B-206ENST00000574226 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.01■□□□□ 0.31
TVP23B-206ENST00000574226 A0A1B0GTW7 788 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 PAGE1O75459 146 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 GFPT2O94808 682 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 ZNF18P17022 549 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 RNASE9P60153 205 aaKnown RBP17.01■□□□□ 0.31
TVP23B-206ENST00000574226 UBXN1Q04323 297 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 DEUP1Q05D60 604 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 ZNF177Q13360 481 aaPredicted RBP17.01■□□□□ 0.31
TVP23B-206ENST00000574226 DEFB119Q8N690 84 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 MYEOVQ96EZ4 313 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 MYO19Q96H55 970 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 C1orf74Q96LT6 269 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 BPIFA3Q9BQP9 254 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 BTBD1Q9H0C5 482 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 SGK2Q9HBY8 427 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 ARHGEF38Q9NXL2 777 aa17.01■□□□□ 0.31
TVP23B-206ENST00000574226 NOCTQ9UK39 431 aaKnown RBP17.01■□□□□ 0.31
TVP23B-206ENST00000574226 ATXN2Q99700 1313 aaKnown RBP17■□□□□ 0.31
TVP23B-206ENST00000574226 UPK3BL1B0FP48 263 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 UPK3BL2E5RIL1 263 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 ARHGAP33O14559 1287 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 KCNK5O95279 499 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 CYP1A1P04798 512 aaPredicted RBP17■□□□□ 0.31
TVP23B-206ENST00000574226 MMEP08473 750 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 CEACAM1P13688 526 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 SULT1E1P49888 294 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 CDH4P55283 916 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 RPS14P62263 151 aaKnown RBP17■□□□□ 0.31
TVP23B-206ENST00000574226 TYRO3Q06418 890 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 SYCP1Q15431 976 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 NAA35Q5VZE5 725 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 LRRC31Q6UY01 552 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 HDDC3Q8N4P3 179 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 ZNF366Q8N895 744 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 MRGPRX3Q96LB0 322 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 TKTL2Q9H0I9 626 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 NLRC4Q9NPP4 1024 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 PIGVQ9NUD9 493 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 VANGL2Q9ULK5 521 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 TPX2Q9ULW0 747 aaKnown RBP17■□□□□ 0.31
TVP23B-206ENST00000574226 HS3ST4Q9Y661 456 aa17■□□□□ 0.31
TVP23B-206ENST00000574226 TPRP12270 2363 aaKnown RBP17■□□□□ 0.31
TVP23B-206ENST00000574226 SMTNL1A8MU46 457 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 OPHN1O60890 802 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 MMP8P22894 467 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 SLC14A1Q13336 389 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 MMS22LQ6ZRQ5 1243 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 SETD3Q86TU7 594 aaPredicted RBP16.99■□□□□ 0.31
TVP23B-206ENST00000574226 CPA5Q8WXQ8 436 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 HAPLN3Q96S86 360 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 SIK2Q9H0K1 926 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 SLC32A1Q9H598 525 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 RETREG1Q9H6L5 497 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 CD93Q9NPY3 652 aa16.99■□□□□ 0.31
TVP23B-206ENST00000574226 TMEM59LQ9UK28 342 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms