RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PDGFRAP16234 1089 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 SULT1E1P49888 294 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 ATXN3P54252 364 aaPredicted RBP26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 CENPCQ03188 943 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 NUMA1Q14980 2115 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 RABGAP1LQ5R372 815 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 CCDC183Q5T5S1 534 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 PSAPL1Q6NUJ1 521 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 DHX40Q8IX18 779 aaKnown RBP26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 SLC20A1Q8WUM9 679 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 PIGVQ9NUD9 493 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 RRN3Q9NYV6 651 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 LIMA1Q9UHB6 759 aaKnown RBP26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 SLCO3A1Q9UIG8 710 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 SIK3Q9Y2K2 1263 aa26.88■■□□□ 1.89
NPLOC4-215ENST00000574095 METTL12A8MUP2 240 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 TTC34A8MYJ7 566 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 GOLGA8SH3BPF8 625 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 GIPC1O14908 333 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 SIN3BO75182 1162 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 ADCY5O95622 1261 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 LSM8O95777 96 aaKnown RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 DNTTP04053 509 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 SRPRAP08240 638 aaKnown RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 C7P10643 843 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 MZF1P28698 734 aaPredicted RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 ACSL1P33121 698 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 IRAK1P51617 712 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 NOMO3P69849 1222 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 ECT2LQ008S8 904 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 HNRNPA1L2Q32P51 320 aaKnown RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 TTC39BQ5VTQ0 682 aaPredicted RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 NAA35Q5VZE5 725 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 C14orf80Q86SX3 495 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 DNASE2BQ8WZ79 361 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 RPL10LQ96L21 214 aaKnown RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 SIK2Q9H0K1 926 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 MIR1-1HGQ9H1L0 117 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 WDCPQ9H6R7 721 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 SUSD2Q9UGT4 822 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 NOCTQ9UK39 431 aaKnown RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 STAP1Q9ULZ2 295 aa26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 ASCC3Q8N3C0 2202 aaKnown RBP26.87■■□□□ 1.89
NPLOC4-215ENST00000574095 A0A1B0GVM2 712 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 TCAF2A6NFQ2 919 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 ARHGAP33O14559 1287 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 GNSP15586 552 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 CDK11BP21127 795 aaKnown RBP26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 SOX5P35711 763 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 NOVA1P51513 510 aaKnown RBP26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 JAM2P57087 298 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 SYCP1Q15431 976 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 SH3PXD2AQ5TCZ1 1133 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 ZNF776Q68DI1 518 aaPredicted RBP26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 KDM1BQ8NB78 822 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 ANKRD20A12PQ8NF67 263 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 OR2I1PQ8NGU4 316 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 NT5C3BQ969T7 300 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 PCMTD1Q96MG8 357 aaPredicted RBP26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 TBCBQ99426 244 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 TKTL2Q9H0I9 626 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 RSPH9Q9H1X1 276 aaPredicted RBP26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 ANLNQ9NQW6 1124 aa26.86■■□□□ 1.89
NPLOC4-215ENST00000574095 CHRNB2P17787 502 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 SCNN1AP37088 669 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 CXCR3P49682 368 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 STK19P49842 368 aaPredicted RBP26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 ZBTB16Q05516 673 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 DEUP1Q05D60 604 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 MTA1Q13330 715 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 SLC12A1Q13621 1099 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 NCAPHQ15003 741 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 C9orf64Q5T6V5 341 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 RNF219Q5W0B1 726 aaPredicted RBP26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 CXorf57Q6NSI4 855 aaKnown RBP26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 ZNF677Q86XU0 584 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 ZCCHC9Q8N567 271 aaKnown RBP26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 MSANTD4Q8NCY6 345 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 C6orf106Q9H6K1 298 aaPredicted RBP26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 ARHGEF38Q9NXL2 777 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 SNX10Q9Y5X0 201 aa26.85■■□□□ 1.89
NPLOC4-215ENST00000574095 I6L893 689 aaPredicted RBP26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 SYPP08247 313 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 FLT3P36888 993 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 FMO1Q01740 532 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 CDR2Q01850 454 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 SLC25A52Q3SY17 297 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 TRNP1Q6NT89 227 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 SND1Q7KZF4 910 aaKnown RBP eCLIP26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 MINDY1Q8N5J2 469 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 SPAG5Q96R06 1193 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 BTBD1Q9H0C5 482 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 TMEM63CQ9P1W3 806 aa26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 EIF2B4Q9UI10 523 aaKnown RBP26.84■■□□□ 1.89
NPLOC4-215ENST00000574095 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.83■■□□□ 1.89
NPLOC4-215ENST00000574095 A0A1B0GTW7 788 aa26.83■■□□□ 1.89
NPLOC4-215ENST00000574095 TARSL2A2RTX5 802 aaKnown RBP26.83■■□□□ 1.89
NPLOC4-215ENST00000574095 LGALS16A8MUM7 142 aa26.83■■□□□ 1.89
NPLOC4-215ENST00000574095 F9P00740 461 aa26.83■■□□□ 1.89
NPLOC4-215ENST00000574095 STAT1P42224 750 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms