RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 TM9SF3Q9HD45 589 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 FBXL12Q9NXK8 326 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 AJAP1Q9UKB5 411 aaPredicted RBP21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 ZMIZ1Q9ULJ6 1067 aa21.84■■□□□ 1.09
CHRNB1-206ENST00000574054 KCNU1A8MYU2 1149 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 MID1O15344 667 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 HSF2BPO75031 334 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 SRPRAP08240 638 aaKnown RBP21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 SLC2A3P11169 496 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 ABCB4P21439 1286 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 KRT9P35527 623 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 CST6Q15828 149 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 EFHC1Q5JVL4 640 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 RABGAP1LQ5R372 815 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 C9orf64Q5T6V5 341 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 OR6B2Q6IFH4 312 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 MMAAQ8IVH4 418 aaKnown RBP21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 APCDD1Q8J025 514 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 KDM1BQ8NB78 822 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 RPL10LQ96L21 214 aaKnown RBP21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 SLC2A13Q96QE2 648 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 TMEM121BQ9BXQ6 578 aaPredicted RBP21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 SYNCQ9H7C4 482 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 TM7SF3Q9NS93 570 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 SLCO3A1Q9UIG8 710 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 DNAJC12Q9UKB3 198 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 SCML1Q9UN30 329 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 PCDHGC3Q9UN70 934 aa21.83■■□□□ 1.09
CHRNB1-206ENST00000574054 DMXL2Q8TDJ6 3036 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 EDDM13A0A1B0GTR0 161 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 A0A1W2PP55 124 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 RNASEH2AO75792 299 aaKnown RBP21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 GLI1P08151 1106 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 PDGFRAP16234 1089 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 CD27P26842 260 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 CCR1P32246 355 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 PSMD8P48556 350 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 SFSWAPQ12872 951 aaKnown RBP21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 KIF19Q2TAC6 998 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 LAYNQ6UX15 382 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 C11orf57Q6ZUT1 292 aaPredicted RBP21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 FAM183BPQ6ZVS7 135 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 USP30Q70CQ3 517 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 ADAT2Q7Z6V5 191 aaKnown RBP21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 OMDQ99983 421 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 SIX2Q9NPC8 291 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 ASNSD1Q9NWL6 643 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 CHMP5Q9NZZ3 219 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 SERGEFQ9UGK8 458 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 MSRB2Q9Y3D2 182 aa21.82■■□□□ 1.08
CHRNB1-206ENST00000574054 SPEGQ15772 3267 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 TARSL2A2RTX5 802 aaKnown RBP21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 TMEM8BA6NDV4 472 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 ERBB2P04626 1255 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 FTH1P19P0C7X4 201 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 ZNF883P0CG24 379 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 PNMA6AP0CW24 399 aaPredicted RBP21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 STK19P49842 368 aaPredicted RBP21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 SNX16P57768 344 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 NME3Q13232 169 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 ARID5BQ14865 1188 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 MAN2A1Q16706 1144 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 HSP90AA4PQ58FG1 418 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 KIAA0895LQ68EN5 471 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 SLC47A2Q86VL8 602 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 FAM114A1Q8IWE2 563 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 CCAR2Q8N163 923 aaKnown RBP21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 PNPLA1Q8N8W4 532 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 KDF1Q8NAX2 398 aaPredicted RBP21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 PRMT1Q99873 361 aaKnown RBP21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 CLSTN2Q9H4D0 955 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 PCOLCE2Q9UKZ9 415 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 ANKRD6Q9Y2G4 727 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 SNX11Q9Y5W9 270 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 ZFHX4Q86UP3 3567 aa21.81■■□□□ 1.08
CHRNB1-206ENST00000574054 FREM2Q5SZK8 3169 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 FOXN3O00409 490 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 PES1O00541 588 aaKnown RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 PRKCSHP14314 528 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 MZF1P28698 734 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 SLC8A1P32418 973 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 GRIA4P48058 902 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 CENPCQ03188 943 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 EIF4EBP2Q13542 120 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 TTC39BQ5VTQ0 682 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 NCEH1Q6PIU2 408 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 LRSAM1Q6UWE0 723 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 OLFML1Q6UWY5 402 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 RAB44Q7Z6P3 723 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 STK40Q8N2I9 435 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 ZCCHC14Q8WYQ9 949 aaKnown RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 RPRD1AQ96P16 312 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 NEUROG2Q9H2A3 272 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 OSGEPQ9NPF4 335 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 PLCB1Q9NQ66 1216 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 APOBEC2Q9Y235 224 aaKnown RBP21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 CABIN1Q9Y6J0 2220 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 ITIH6Q6UXX5 1313 aa21.8■■□□□ 1.08
CHRNB1-206ENST00000574054 DSPP15924 2871 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms