RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 H0Y626 953 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 PABPC1P11940 636 aaKnown RBP16.3■□□□□ 0.2
CHD3-215ENST00000572750 TDGF1P13385 188 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 DESP17661 470 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 CDC25BP30305 580 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 ADRA1BP35368 520 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 WASP42768 502 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 CXCL12P48061 93 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 MRPS21P82921 87 aaKnown RBP16.3■□□□□ 0.2
CHD3-215ENST00000572750 LMAN2Q12907 356 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 ARL13BQ3SXY8 428 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 DAB2IPQ5VWQ8 1189 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 CHST9Q7L1S5 443 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHD3-215ENST00000572750 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 CCDC26Q8TAB7 109 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 BTBD6Q96KE9 485 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 HAPLN3Q96S86 360 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 ACOX2Q99424 681 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 TMEM51Q9NW97 253 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 ANAPC7Q9UJX3 599 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 MMP17Q9ULZ9 603 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 STARD13Q9Y3M8 1113 aa16.3■□□□□ 0.2
CHD3-215ENST00000572750 NYNRINQ9P2P1 1898 aaKnown RBP16.3■□□□□ 0.2
CHD3-215ENST00000572750 K7ESF4 209 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 SGK1O00141 431 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 ADAM23O75077 832 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 ATG13O75143 517 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 CNTN5O94779 1100 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 SP9P0CG40 484 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 DMWDQ09019 674 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 DMC1Q14565 340 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 ALFQ53S48 1182 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 ARTNQ5T4W7 220 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 CXorf57Q6NSI4 855 aaKnown RBP16.29■□□□□ 0.2
CHD3-215ENST00000572750 SYT13Q7L8C5 426 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 TFAP2DQ7Z6R9 452 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 ADIPOR2Q86V24 386 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 CCDC117Q8IWD4 279 aaPredicted RBP16.29■□□□□ 0.2
CHD3-215ENST00000572750 CHPFQ8IZ52 775 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 AHI1Q8N157 1196 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 FIBINQ8TAL6 211 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 WFIKKN2Q8TEU8 576 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 FNIP1Q8TF40 1166 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
CHD3-215ENST00000572750 NTAN1Q96AB6 310 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 ERLEC1Q96DZ1 483 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 LMLNQ96KR4 655 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 PANX2Q96RD6 677 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 PEBP4Q96S96 227 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 CACNA2D2Q9NY47 1150 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 MPP6Q9NZW5 540 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 FBXO4Q9UKT5 387 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 SLC8A2Q9UPR5 921 aa16.29■□□□□ 0.2
CHD3-215ENST00000572750 EML5Q05BV3 1969 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 DCDC2BA2VCK2 349 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 FAM72CH0Y354 149 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 PAPSS2O95340 614 aaPredicted RBP16.28■□□□□ 0.2
CHD3-215ENST00000572750 H2AFZP0C0S5 128 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 HNRNPLP14866 589 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHD3-215ENST00000572750 CSKP41240 450 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
CHD3-215ENST00000572750 SCAPQ12770 1279 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 EIF4HQ15056 248 aaKnown RBP16.28■□□□□ 0.2
CHD3-215ENST00000572750 C5orf22Q49AR2 442 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 EFHC2Q5JST6 749 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 FAM72AQ5TYM5 149 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 HEATR6Q6AI08 1181 aaKnown RBP16.28■□□□□ 0.2
CHD3-215ENST00000572750 FAM72DQ6L9T8 149 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 LRRC31Q6UY01 552 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 MAMSTRQ6ZN01 415 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 H2AFVQ71UI9 128 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 KIAA0907Q7Z7F0 614 aaPredicted RBP16.28■□□□□ 0.2
CHD3-215ENST00000572750 SLFN11Q7Z7L1 901 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 FAM72BQ86X60 149 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 PYROXD2Q8N2H3 581 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 ARFGAP1Q8N6T3 406 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 ZNF557Q8N988 423 aaPredicted RBP16.28■□□□□ 0.2
CHD3-215ENST00000572750 OR52K2Q8NGK3 314 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 ZNF564Q8TBZ8 553 aaPredicted RBP16.28■□□□□ 0.2
CHD3-215ENST00000572750 CYB5D2Q8WUJ1 264 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 C1orf74Q96LT6 269 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 GPATCH2LQ9NWQ4 482 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 ELOVL2Q9NXB9 296 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 OR12D3Q9UGF7 316 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 NEU3Q9UQ49 428 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 NBEAQ8NFP9 2946 aa16.28■□□□□ 0.2
CHD3-215ENST00000572750 IGLV3-10A0A075B6K4 115 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 SOWAHDA6NJG2 315 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 LRCH4O75427 683 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 HOXB2P14652 356 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 TCF4P15884 667 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 HSF5Q4G112 596 aaPredicted RBP16.27■□□□□ 0.2
CHD3-215ENST00000572750 PITRM1Q5JRX3 1037 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 EOGTQ5NDL2 527 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 MANEALQ5VSG8 457 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 MBLAC2Q68D91 279 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 TMEM92Q6UXU6 159 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms