RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 PRICKLE2Q7Z3G6 844 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 UNC45BQ8IWX7 931 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 ANKRD52Q8NB46 1076 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 HJURPQ8NCD3 748 aaPredicted RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 OR4C6Q8NH72 309 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 WFDC5Q8TCV5 224 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 FAXDC2Q96IV6 333 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 FAM129BQ96TA1 746 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 ABCG4Q9H172 646 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 KDM4CQ9H3R0 1056 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 LRRC4Q9HBW1 653 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 APOBEC3GQ9HC16 384 aaKnown RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 ABCC13Q9NSE7 274 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 SFMBT1Q9UHJ3 866 aa11.76□□□□□ -0.53
CHMP6-202ENST00000571457 HEMK1Q9Y5R4 338 aaPredicted RBP11.76□□□□□ -0.53
CHMP6-202ENST00000571457 PDXKO00764 312 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 SLC7A4O43246 635 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 SDC3O75056 442 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 IL1BP01584 269 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 NR3C1P04150 777 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 GP1BAP07359 652 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 ALPPL2P10696 532 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 CKMT1AP12532 417 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 RBMS1P29558 406 aaKnown RBP11.75□□□□□ -0.53
CHMP6-202ENST00000571457 DUSP3P51452 185 aaPredicted RBP11.75□□□□□ -0.53
CHMP6-202ENST00000571457 CDH18Q13634 790 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 ELAVL3Q14576 367 aaKnown RBP11.75□□□□□ -0.53
CHMP6-202ENST00000571457 CEP135Q66GS9 1140 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 RFWD3Q6PCD5 774 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 SIX6OS1Q8N1H7 587 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 AADATQ8N5Z0 425 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 TAS1R2Q8TE23 839 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 EDEM1Q92611 657 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 AZIN2Q96A70 460 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 GRAMD1AQ96CP6 724 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 VCPIP1Q96JH7 1222 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 MRGPRX3Q96LB0 322 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 FAM117AQ9C073 453 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 BLZF1Q9H2G9 400 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 ZSCAN16Q9H4T2 348 aaPredicted RBP11.75□□□□□ -0.53
CHMP6-202ENST00000571457 USP29Q9HBJ7 922 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 ASCL3Q9NQ33 180 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 STIM2Q9P246 746 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 IL17BQ9UHF5 180 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 CYTH4Q9UIA0 394 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 ERVW-1Q9UQF0 538 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 CEP83Q9Y592 693 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 ITIH6Q6UXX5 1313 aa11.75□□□□□ -0.53
CHMP6-202ENST00000571457 TTC34A8MYJ7 566 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 PRAMEF26H0Y7S4 382 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 K7ENP7 123 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 XPO1O14980 1071 aaKnown RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 MAPK13O15264 365 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 SPTLC2O15270 562 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 ACSL4O60488 711 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 RNGTTO60942 597 aaKnown RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 CSO75390 466 aaKnown RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 NTRK1P04629 796 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 SYT1P21579 422 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 DGKAP23743 735 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 NNMTP40261 264 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 SGSHP51688 502 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 VAMP7P51809 220 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 PPP2CBP62714 309 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 PPP2CAP67775 309 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 SETMARQ53H47 684 aaPredicted RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 SGO2Q562F6 1265 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 FAM133BQ5BKY9 247 aaKnown RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 INO80CQ6PI98 192 aaPredicted RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 CCDC81Q6ZN84 652 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 INTS8Q75QN2 995 aaKnown RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 SLC25A45Q8N413 288 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 LINC00301Q8NCQ3 95 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 KLHDC7BQ96G42 594 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 LMLNQ96KR4 655 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 KLHL11Q9NVR0 708 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 ARHGAP20Q9P2F6 1191 aa11.74□□□□□ -0.53
CHMP6-202ENST00000571457 INTS6Q9UL03 887 aaKnown RBP11.74□□□□□ -0.53
CHMP6-202ENST00000571457 A0A1B0GVM2 712 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 NEMP2A6NFY4 417 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 YJEFN3A6XGL0 299 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 E7ENQ6 273 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 POLR2DO15514 142 aaKnown RBP11.73□□□□□ -0.53
CHMP6-202ENST00000571457 CUTAO60888 179 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 PPP6R2O75170 966 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 KRT13P13646 458 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 MZF1P28698 734 aaPredicted RBP11.73□□□□□ -0.53
CHMP6-202ENST00000571457 MAT2AP31153 395 aaKnown RBP11.73□□□□□ -0.53
CHMP6-202ENST00000571457 GCLMP48507 274 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 RAD23BP54727 409 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 ENPEPQ07075 957 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms