RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 KRBA2Q6ZNG9 492 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 SLC35F5Q8WV83 523 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 BAP1Q92560 729 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 SERAC1Q96JX3 654 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 PRORYQ9H606 182 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 ERVMER34-1Q9H9K5 563 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 CEP83Q9Y592 693 aa19.67■□□□□ 0.74
SCARF1-204ENST00000570902 C10orf142B7Z368 130 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 TLR4O00206 839 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 ATXN7O15265 892 aaPredicted RBP19.66■□□□□ 0.74
SCARF1-204ENST00000570902 SLC16A3O15427 465 aaKnown RBP19.66■□□□□ 0.74
SCARF1-204ENST00000570902 FBXO21O94952 628 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 PAEPP09466 180 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 ITPKBP27987 946 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 RGS7P49802 495 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 ADPRHP54922 357 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 NXPH1P58417 271 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 RPS24P62847 133 aaKnown RBP19.66■□□□□ 0.74
SCARF1-204ENST00000570902 KRT85P78386 507 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 ECT2LQ008S8 904 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 NNTQ13423 1086 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 RTP5Q14D33 572 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 STILQ15468 1287 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 PITRM1Q5JRX3 1037 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 PMF1Q6P1K2 205 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 FBXL19Q6PCT2 694 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 LSM14AQ8ND56 463 aaKnown RBP19.66■□□□□ 0.74
SCARF1-204ENST00000570902 OR14C36Q8NHC7 312 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 SLC39A7Q92504 469 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 TSC1Q92574 1164 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 CCDC34Q96HJ3 373 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 SERPINB11Q96P15 392 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 TLR6Q9Y2C9 796 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 ITIH6Q6UXX5 1313 aa19.66■□□□□ 0.74
SCARF1-204ENST00000570902 TTC34A8MYJ7 566 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 PIK3R2O00459 728 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 TLX3O43711 291 aaPredicted RBP19.65■□□□□ 0.74
SCARF1-204ENST00000570902 LUC7L3O95232 432 aaKnown RBP19.65■□□□□ 0.74
SCARF1-204ENST00000570902 RXRGP48443 463 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 PSMD8P48556 350 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 CNGA2Q16280 664 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 MS4A13Q5J8X5 152 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 AADATQ8N5Z0 425 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 UBR7Q8N806 425 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 FCRL2Q96LA5 508 aaPredicted RBP19.65■□□□□ 0.74
SCARF1-204ENST00000570902 HSFY1Q96LI6 401 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 FAM129BQ96TA1 746 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 TSG101Q99816 390 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 ZDHHC9Q9Y397 364 aa19.65■□□□□ 0.74
SCARF1-204ENST00000570902 M0QYV0 167 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 WNT9AO14904 365 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 MAGEC1O60732 1142 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 GABBR2O75899 941 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 NNMTP40261 264 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 CLDN6P56747 220 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 BECN1Q14457 450 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 ELAVL3Q14576 367 aaKnown RBP19.64■□□□□ 0.73
SCARF1-204ENST00000570902 FSCBQ5H9T9 825 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 NAPEPLDQ6IQ20 393 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 TMEM270Q6UE05 265 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 MMS22LQ6ZRQ5 1243 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 SMYD4Q8IYR2 804 aaPredicted RBP19.64■□□□□ 0.73
SCARF1-204ENST00000570902 CACTIN-AS1Q8N1I8 211 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 MFSD2AQ8NA29 543 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 SNIP1Q8TAD8 396 aaKnown RBP19.64■□□□□ 0.73
SCARF1-204ENST00000570902 TFAP2BQ92481 460 aa19.64■□□□□ 0.73
SCARF1-204ENST00000570902 NUCKS1Q9H1E3 243 aaKnown RBP19.64■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3DA0A087WVF3 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3IA0A087WXS9 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3EA0A087X179 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3KA0A087X1G2 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3FA6NER0 549 aaPredicted RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3LB9A6J9 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 LATO43561 262 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 IL1BP01584 269 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 PRB1P04280 392 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3HP0C7X1 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 CKMT2P17540 419 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 NUDT1P36639 197 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 CTSOP43234 321 aaPredicted RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 FKBP3Q00688 224 aaKnown RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 LRMPQ12912 555 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 DCAF6Q58WW2 860 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 SFMBT2Q5VUG0 894 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3GQ6DHY5 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3CQ6IPX1 549 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 PRPF39Q86UA1 669 aaKnown RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 IQCHQ86VS3 1027 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TBC1D3Q8IZP1 549 aaPredicted RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 CFAP52Q8N1V2 620 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 STK40Q8N2I9 435 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 DQX1Q8TE96 717 aaKnown RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 CLEC4CQ8WTT0 213 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 MYEOVQ96EZ4 313 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 FCRL3Q96P31 734 aaPredicted RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 TRIM62Q9BVG3 475 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 KDM4CQ9H3R0 1056 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 RMND1Q9NWS8 449 aa19.63■□□□□ 0.73
SCARF1-204ENST00000570902 ARMCX3Q9UH62 379 aaPredicted RBP19.63■□□□□ 0.73
SCARF1-204ENST00000570902 SLCO3A1Q9UIG8 710 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms