RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PCDHB4Q9Y5E5 795 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 RAI2Q9Y5P3 530 aa12.51□□□□□ -0.41
CAPN3-220ENST00000569827 ZNF462Q96JM2 2506 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 A0A087WV48 116 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 RFPL3O75679 317 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 ZNF202O95125 648 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 FYNP06241 537 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 C7P10643 843 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 CD38P28907 300 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 MAT2AP31153 395 aaKnown RBP12.5□□□□□ -0.41
CAPN3-220ENST00000569827 SLC8A1P32418 973 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 EIF2S3P41091 472 aaKnown RBP12.5□□□□□ -0.41
CAPN3-220ENST00000569827 ACADVLP49748 655 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 ADPRHP54922 357 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 PITX1P78337 314 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-220ENST00000569827 KRT85P78386 507 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 ENPEPQ07075 957 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 TARDBPQ13148 414 aaKnown RBP eCLIP12.5□□□□□ -0.41
CAPN3-220ENST00000569827 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 RAP1GAP2Q684P5 730 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 NUGGCQ68CJ6 796 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 USP30Q70CQ3 517 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 SCUBE3Q8IX30 993 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 LGI2Q8N0V4 545 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 OR14C36Q8NHC7 312 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 FIBINQ8TAL6 211 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 SLC35F5Q8WV83 523 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 TTC17Q96AE7 1141 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 FAM149B1Q96BN6 582 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 SERAC1Q96JX3 654 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 MYOCQ99972 504 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 COQ4Q9Y3A0 265 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 TENM4Q6N022 2769 aa12.5□□□□□ -0.41
CAPN3-220ENST00000569827 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 COL27A1Q8IZC6 1860 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 A0A1W2PR77 199 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 STX10O60499 249 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 RNASEH1O60930 286 aaKnown RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 C1QL1O75973 258 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 LUC7L3O95232 432 aaKnown RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 IL1BP01584 269 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 EPHA8P29322 1005 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 MCCD1P59942 119 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 INAVAQ3KP66 663 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 MS4A13Q5J8X5 152 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 SYPL2Q5VXT5 272 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 ISM2Q6H9L7 571 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 LCLAT1Q6UWP7 414 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 RRAGAQ7L523 313 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 SPATS2Q86XZ4 545 aaKnown RBP12.49□□□□□ -0.41
CAPN3-220ENST00000569827 ARHGEF19Q8IW93 802 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 UNC45BQ8IWX7 931 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 PPM1KQ8N3J5 372 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 ENGASEQ8NFI3 743 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 OR2T34Q8NGX1 318 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 PTPRN2Q92932 1015 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 SLC35C1Q96A29 364 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 NXPE2Q96DL1 559 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 FAM129BQ96TA1 746 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 GDF3Q9NR23 364 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 ST7Q9NRC1 585 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
CAPN3-220ENST00000569827 EDDM13A0A1B0GTR0 161 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 LRRC72A6NJI9 287 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 PAPSS1O43252 624 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-220ENST00000569827 RTN2O75298 545 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 ASLP04424 464 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 PDGFRAP16234 1089 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 MZF1P28698 734 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-220ENST00000569827 GGCXP38435 758 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 FMO5P49326 533 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 IRAK1P51617 712 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 YWHAEP62258 255 aaKnown RBP12.48□□□□□ -0.41
CAPN3-220ENST00000569827 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
CAPN3-220ENST00000569827 MPP7Q5T2T1 576 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 C6orf118Q5T5N4 469 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 TMPRSS12Q86WS5 348 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 CHSY1Q86X52 802 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 SCML4Q8N228 414 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 TSG101Q99816 390 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 SARDHQ9UL12 918 aa12.48□□□□□ -0.41
CAPN3-220ENST00000569827 ITIH6Q6UXX5 1313 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 SYNJ2BP-COX16A0A087WUM0 186 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3DA0A087WVF3 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3IA0A087WXS9 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3EA0A087X179 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3KA0A087X1G2 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TYW5A2RUC4 315 aaKnown RBP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3FA6NER0 549 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3LB9A6J9 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TLR4O00206 839 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms