RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 FAM72CH0Y354 149 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 I6L893 689 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ARVCFO00192 962 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 AP3B1O00203 1094 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 KLF11O14901 512 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 SYN3O14994 580 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 PSMD3O43242 534 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 EDF1O60869 148 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 SPAG7O75391 227 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 DNAJC8O75937 253 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 KRT37O76014 449 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 KRT38O76015 456 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 POMCP01189 267 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 INHBAP08476 426 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 NCAM1P13591 858 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ALADP13716 330 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 VAV1P15498 845 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ERCC2P18074 760 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 KRT4P19013 534 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 CA4P22748 312 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 BDNFP23560 247 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 HOXC13P31276 330 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 GRK4P32298 578 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 GBP2P32456 591 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ETV4P43268 484 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 MAGEA11P43364 429 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 BRCC3P46736 316 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 IFNAR2P48551 515 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 NPY2RP49146 381 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 NEK3P51956 506 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 C1QTNF8P60827 252 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 YWHAGP61981 247 aaKnown RBP eCLIP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 COG7P83436 770 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 TSPY1Q01534 308 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 CCDC15Q0P6D6 951 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FAAP100Q0VG06 881 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 GALNT2Q10471 571 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 NME3Q13232 169 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 NAB1Q13506 487 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 MRPL58Q14197 206 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 MBTPS1Q14703 1052 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 PPP2R5DQ14738 602 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 LRRC14Q15048 493 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 NFE2Q16621 373 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 KBTBD12Q3ZCT8 623 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 NOMO2Q5JPE7 1267 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 SPDYAQ5MJ70 313 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 BRMS1LQ5PSV4 323 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ARTNQ5T4W7 220 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 RNF187Q5TA31 235 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FAM72AQ5TYM5 149 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 HHATQ5VTY9 493 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FAM72DQ6L9T8 149 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 GLB1LQ6UWU2 654 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 UNC5AQ6ZN44 842 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 C4orf50Q6ZRC1 276 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 GPRIN1Q7Z2K8 1008 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 TRPM8Q7Z2W7 1104 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 SPATA21Q7Z572 469 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 PRPF39Q86UA1 669 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 MON1AQ86VX9 555 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 CHSY1Q86X52 802 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FAM72BQ86X60 149 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 LRRC49Q8IUZ0 686 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 COLGALT2Q8IYK4 626 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 DCP1BQ8IZD4 617 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF567Q8N184 647 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 LZTR1Q8N653 840 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ANKRD42Q8N9B4 389 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 COLGALT1Q8NBJ5 622 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 OR10T2Q8NGX3 314 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 GSDMBQ8TAX9 411 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 SLC7A14Q8TBB6 771 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ZSCAN18Q8TBC5 510 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF398Q8TD17 642 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 MGARPQ8TDB4 240 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 DQX1Q8TE96 717 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF75CPQ92670 426 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FATE1Q969F0 183 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 HDAC11Q96DB2 347 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 OXNAD1Q96HP4 312 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FUBP3Q96I24 572 aaKnown RBP eCLIP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 C8orf48Q96LL4 319 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 GLT1D1Q96MS3 346 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 TGS1Q96RS0 853 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 LGMNQ99538 433 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 PITPNM3Q9BZ71 974 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ZCWPW1Q9H0M4 648 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 UNC93B1Q9H1C4 597 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 RASSF4Q9H2L5 321 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ANLNQ9NQW6 1124 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ABCC13Q9NSE7 274 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 TRMT13Q9NUP7 481 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 TMLHEQ9NVH6 421 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 COMMD8Q9NX08 183 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 WBP1LQ9NX94 342 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 MKS1Q9NXB0 559 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 FNIP2Q9P278 1114 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms