RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 DAAM2Q86T65 1068 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 NT5DC3Q86UY8 548 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 SFTPA1Q8IWL2 248 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 MCOLN2Q8IZK6 566 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 MAML2Q8IZL2 1156 aaPredicted RBP12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 ARHGEF26Q96DR7 871 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 HES6Q96HZ4 224 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 PBKQ96KB5 322 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 WDCPQ9H6R7 721 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 PRMT8Q9NR22 394 aaPredicted RBP12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 PIGVQ9NUD9 493 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 XPO7Q9UIA9 1087 aaKnown RBP12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 FBXO10Q9UK96 956 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 CACNA1HO95180 2353 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 CHURC1-FNTBB4DL54 471 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 BUB1BO60566 1050 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 MTA2O94776 668 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 SEC31AO94979 1220 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 GJB6O95452 261 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 RRM1P23921 792 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 HOXD9P28356 352 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 CXCR3P49682 368 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 ATP11AP98196 1134 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 SATB1Q01826 763 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 MS4A13Q5J8X5 152 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 BEND6Q5SZJ8 279 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 MPP7Q5T2T1 576 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 RAP1GAP2Q684P5 730 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 PKN3Q6P5Z2 889 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 CHSY1Q86X52 802 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 JOSD2Q8TAC2 188 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 RXFP2Q8WXD0 754 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 ATOH1Q92858 354 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 ACDQ96AP0 544 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 SLC2A11Q9BYW1 496 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 SLC27A6Q9Y2P4 619 aa12.95□□□□□ -0.34
NSMCE1-214ENST00000569236 C2CD4BA6NLJ0 364 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 SIGLEC16A6NMB1 481 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 F5H5T6 163 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 KCNK3O14649 394 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 TBL1XO60907 577 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 CISD3P0C7P0 127 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 TACR2P21452 398 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 RDXP35241 583 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 RFC1P35251 1148 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 SGSHP51688 502 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 MRPS21P82921 87 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 CDO1Q16878 200 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 C11orf63Q6NUN7 778 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 ACTRT1Q8TDG2 376 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 USP33Q8TEY7 942 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 MS4A14Q96JA4 679 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 PRICKLE1Q96MT3 831 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 FUT8Q9BYC5 575 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 CLEC4EQ9ULY5 219 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 TCRBV5S1A1TA0A578 114 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 PAGE1O75459 146 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 SP9P0CG40 484 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 GPD1P21695 349 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 TIE1P35590 1138 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 PTPN9P43378 593 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 C15orf59Q2T9L4 293 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 ZNF528Q3MIS6 628 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 GLE1Q53GS7 698 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 DCUN1D2Q6PH85 259 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 TSSK4Q6SA08 328 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 SYT13Q7L8C5 426 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 BNIPLQ7Z465 357 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 ANKS1BQ7Z6G8 1248 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 CCDC117Q8IWD4 279 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 LGI2Q8N0V4 545 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 ZNF557Q8N988 423 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 KCNV2Q8TDN2 545 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 PARVAQ9NVD7 372 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 C2orf42Q9NWW7 574 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 ARHGEF38Q9NXL2 777 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 SMARCAL1Q9NZC9 954 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 STIM2Q9P246 746 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 AMFRQ9UKV5 643 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 SLC8A2Q9UPR5 921 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 STARD13Q9Y3M8 1113 aa12.94□□□□□ -0.34
NSMCE1-214ENST00000569236 ANTXRLA6NF34 631 aa12.93□□□□□ -0.34
NSMCE1-214ENST00000569236 PRRT4C9JH25 899 aa12.93□□□□□ -0.34
NSMCE1-214ENST00000569236 SASH3O75995 380 aa12.93□□□□□ -0.34
NSMCE1-214ENST00000569236 ENDOD1O94919 500 aa12.93□□□□□ -0.34
NSMCE1-214ENST00000569236 CYP1A2P05177 515 aa12.93□□□□□ -0.34
NSMCE1-214ENST00000569236 KIR2DL1P43626 348 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-214ENST00000569236 DNA2P51530 1060 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms