RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 TCAF2A6NFQ2 919 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 ANP32AP39687 249 aaKnown RBP19.2■□□□□ 0.66
CPNE7-209ENST00000568977 BPIFB4P59827 614 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 NME3Q13232 169 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 ARID5BQ14865 1188 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 RABGAP1LQ5R372 815 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 TTC39BQ5VTQ0 682 aaPredicted RBP19.2■□□□□ 0.66
CPNE7-209ENST00000568977 RNF219Q5W0B1 726 aaPredicted RBP19.2■□□□□ 0.66
CPNE7-209ENST00000568977 C1orf216Q8TAB5 229 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 PABPC3Q9H361 631 aaKnown RBP19.2■□□□□ 0.66
CPNE7-209ENST00000568977 SCML1Q9UN30 329 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 SLCO1B1Q9Y6L6 691 aa19.2■□□□□ 0.66
CPNE7-209ENST00000568977 TTC34A8MYJ7 566 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 TOP3BO95985 862 aaKnown RBP19.19■□□□□ 0.66
CPNE7-209ENST00000568977 PDGFRAP16234 1089 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 SPINK2P20155 84 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 NUMBP49757 651 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 SIM1P81133 766 aaPredicted RBP19.19■□□□□ 0.66
CPNE7-209ENST00000568977 ECT2LQ008S8 904 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 SLC6A3Q01959 620 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 CENPCQ03188 943 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 SLC14A1Q13336 389 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 CST6Q15828 149 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 KLHDC7AQ5VTJ3 777 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 OTUD1Q5VV17 481 aaPredicted RBP19.19■□□□□ 0.66
CPNE7-209ENST00000568977 FBXL22Q6P050 247 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 CLEC17AQ6ZS10 378 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 ZDHHC17Q8IUH5 632 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 ZNF397Q8NF99 534 aaPredicted RBP19.19■□□□□ 0.66
CPNE7-209ENST00000568977 BIRC7Q96CA5 298 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 PDCL3Q9H2J4 239 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 SGK2Q9HBY8 427 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 KNL1Q8NG31 2342 aa19.19■□□□□ 0.66
CPNE7-209ENST00000568977 TP53BP1Q12888 1972 aaPredicted RBP19.19■□□□□ 0.66
CPNE7-209ENST00000568977 TMEM131Q92545 1883 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 USP24Q9UPU5 2620 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 EDDM13A0A1B0GTR0 161 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 M0QYT0 321 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 RNASEH1O60930 286 aaKnown RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 CER1O95813 267 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 CYP11B1P15538 503 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 EEF1GP26641 437 aaKnown RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 CDH5P33151 784 aaPredicted RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 NOS2P35228 1153 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 GGCXP38435 758 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 STK19P49842 368 aaPredicted RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 IRAK1P51617 712 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 FAM193AP78312 1265 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 BNC1Q01954 994 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 MTA1Q13330 715 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 SLC12A1Q13621 1099 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 TCP11X2Q5H9J9 407 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 CT47A1Q5JQC4 288 aaPredicted RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 C9orf64Q5T6V5 341 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 CXorf57Q6NSI4 855 aaKnown RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 USP30Q70CQ3 517 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 TMEM35BQ8NCS4 154 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 RPL10LQ96L21 214 aaKnown RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 RPRD1AQ96P16 312 aaPredicted RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 NAA15Q9BXJ9 866 aaKnown RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 LMBRD1Q9NUN5 540 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 FBXL12Q9NXK8 326 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 TAB2Q9NYJ8 693 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 SERGEFQ9UGK8 458 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 SLCO3A1Q9UIG8 710 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 VANGL2Q9ULK5 521 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 KMT2BQ9UMN6 2715 aaPredicted RBP19.18■□□□□ 0.66
CPNE7-209ENST00000568977 PLXNA2O75051 1894 aa19.18■□□□□ 0.66
CPNE7-209ENST00000568977 TARSL2A2RTX5 802 aaKnown RBP19.17■□□□□ 0.66
CPNE7-209ENST00000568977 F8VZ95 297 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 MID1O15344 667 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 SH3BP5O60239 455 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 PAGE1O75459 146 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 UCHL3P15374 230 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 MZF1P28698 734 aaPredicted RBP19.17■□□□□ 0.66
CPNE7-209ENST00000568977 MATKP42679 507 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 AFF3P51826 1226 aaKnown RBP19.17■□□□□ 0.66
CPNE7-209ENST00000568977 AUHQ13825 339 aaKnown RBP19.17■□□□□ 0.66
CPNE7-209ENST00000568977 TAF3Q5VWG9 929 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 MMAAQ8IVH4 418 aaKnown RBP19.17■□□□□ 0.66
CPNE7-209ENST00000568977 NAXDQ8IW45 347 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 GANCQ8TET4 914 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 IGSF8Q969P0 613 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 CAMK1GQ96NX5 476 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 NPY6RQ99463 290 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 ADAM33Q9BZ11 813 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 IL21RQ9HBE5 538 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 RRN3Q9NYV6 651 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 STAP1Q9ULZ2 295 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 NCKAP1Q9Y2A7 1128 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 FNDC3AQ9Y2H6 1198 aaKnown RBP19.17■□□□□ 0.66
CPNE7-209ENST00000568977 HS3ST4Q9Y661 456 aa19.17■□□□□ 0.66
CPNE7-209ENST00000568977 A0A1B0GVT2 93 aa19.16■□□□□ 0.66
CPNE7-209ENST00000568977 A0A1W2PP55 124 aa19.16■□□□□ 0.66
CPNE7-209ENST00000568977 FAM170AA1A519 330 aa19.16■□□□□ 0.66
CPNE7-209ENST00000568977 FSBPO95073 299 aa19.16■□□□□ 0.66
CPNE7-209ENST00000568977 PSMD8P48556 350 aa19.16■□□□□ 0.66
CPNE7-209ENST00000568977 CSNK1EP49674 416 aaKnown RBP19.16■□□□□ 0.66
CPNE7-209ENST00000568977 SULT1E1P49888 294 aa19.16■□□□□ 0.66
CPNE7-209ENST00000568977 OXCT1P55809 520 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms